Analysis of interatomic Contacts of Structural Units in PDB entry:
5IZ9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5IZ9 entry

There are 2 chains in PDB entry 5IZ9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 406LYS 738
B
 GLY 1ASP 7
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 5IZ9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
408 427Right-handed alpha
Helix 2
AA2
A
445 457Right-handed alpha
Helix 3
AA3
A
459 470Right-handed alpha
Helix 4
AA4
A
470 487Right-handed alpha
Helix 5
AA5
A
491 510Right-handed alpha
Helix 6
AA6
A
512 522Right-handed alpha
Helix 7
AA7
A
522 532Right-handed alpha
Helix 8
AA8
A
533 535Right-handed 310
Helix 9
AA9
A
537 553Right-handed alpha
Helix 10
AB1
A
556 566Right-handed alpha
Helix 11
AB2
A
567 579Right-handed alpha
Helix 12
AB3
A
581 597Right-handed alpha
Helix 13
AB4
A
599 609Right-handed alpha
Helix 14
AB5
A
611 621Right-handed alpha
Helix 15
AB6
A
629 649Right-handed alpha
Helix 16
AB7
A
649 659Right-handed alpha
Helix 17
AB8
A
660 669Right-handed alpha
Helix 18
AB9
A
673 688Right-handed alpha
Helix 19
AC1
A
691 701Right-handed alpha
Helix 20
AC2
A
702 711Right-handed alpha
Helix 21
AC3
A
715 732Right-handed alpha
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There are no sheets in PDB entry 5IZ9
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il