Analysis of interatomic Contacts of Structural Units in PDB entry:
5J1F


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5J1F entry

There are 2 chains in PDB entry 5J1F (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 746GLU 1000
B
 SER 747GLN 1001
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 5J1F. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
747 777Right-handed alpha
Helix 2
AA2
A
783 794Right-handed alpha
Helix 3
AA3
A
794 818Right-handed alpha
Helix 4
AA4
A
821 936Right-handed alpha
Helix 5
AA5
A
937 944Right-handed alpha
Helix 6
AA6
A
945 967Right-handed alpha
Helix 7
AA7
A
974 1000Right-handed alpha
Helix 8
AA8
B
748 777Right-handed alpha
Helix 9
AA9
B
783 794Right-handed alpha
Helix 10
AB1
B
794 817Right-handed alpha
Helix 11
AB2
B
821 936Right-handed alpha
Helix 12
AB3
B
937 944Right-handed alpha
Helix 13
AB4
B
945 967Right-handed alpha
Helix 14
AB5
B
974 1001Right-handed alpha
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There are no sheets in PDB entry 5J1F
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