Analysis of interatomic Contacts of Structural Units in PDB entry:
5J1G


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5J1G entry

There are 2 chains in PDB entry 5J1G (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 1004GLN 1231
B
 GLU 1005GLY 1233
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 5J1G. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1007 1035Right-handed alpha
Helix 2
AA2
A
1041 1079Right-handed alpha
Helix 3
AA3
A
1086 1143Right-handed alpha
Helix 4
AA4
A
1148 1168Right-handed alpha
Helix 5
AA5
A
1169 1195Right-handed alpha
Helix 6
AA6
A
1200 1231Right-handed alpha
Helix 7
AA7
B
1007 1035Right-handed alpha
Helix 8
AA8
B
1041 1080Right-handed alpha
Helix 9
AA9
B
1086 1142Right-handed alpha
Helix 10
AB1
B
1148 1168Right-handed alpha
Helix 11
AB2
B
1169 1195Right-handed alpha
Helix 12
AB3
B
1200 1233Right-handed alpha
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There are no sheets in PDB entry 5J1G
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