Analysis of interatomic Contacts of Structural Units in PDB entry:
5J2Z


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5J2Z entry

There is 1 chain in PDB entry 5J2Z (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY -1TRP 477
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 31 helices in PDB entry 5J2Z. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
-1 10Right-handed alpha
Helix 2
AA2
A
15 29Right-handed alpha
Helix 3
AA3
A
34 55Right-handed alpha
Helix 4
AA4
A
58 75Right-handed alpha
Helix 5
AA5
A
79 83Right-handed 310
Helix 6
AA6
A
84 95Right-handed alpha
Helix 7
AA7
A
96 106Right-handed alpha
Helix 8
AA8
A
115 134Right-handed alpha
Helix 9
AA9
A
139 146Right-handed alpha
Helix 10
AB1
A
151 155Right-handed 310
Helix 11
AB2
A
156 160Right-handed 310
Helix 12
AB3
A
161 168Right-handed 310
Helix 13
AB4
A
170 185Right-handed alpha
Helix 14
AB5
A
186 198Right-handed alpha
Helix 15
AB6
A
203 219Right-handed alpha
Helix 16
AB7
A
224 236Right-handed alpha
Helix 17
AB8
A
237 238Right-handed 310
Helix 18
AB9
A
239 243Right-handed 310
Helix 19
AC1
A
255 268Right-handed alpha
Helix 20
AC2
A
287 294Right-handed 310
Helix 21
AC3
A
295 301Right-handed 310
Helix 22
AC4
A
302 307Right-handed alpha
Helix 23
AC5
A
316 325Right-handed alpha
Helix 24
AC6
A
328 339Right-handed alpha
Helix 25
AC7
A
342 355Right-handed alpha
Helix 26
AC8
A
361 382Right-handed alpha
Helix 27
AC9
A
387 400Right-handed alpha
Helix 28
AD1
A
400 406Right-handed alpha
Helix 29
AD2
A
417 428Right-handed alpha
Helix 30
AD3
A
433 454Right-handed alpha
Helix 31
AD4
A
459 476Right-handed alpha
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There are no sheets in PDB entry 5J2Z
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