Analysis of interatomic Contacts of Structural Units in PDB entry:
5JGH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5JGH entry

There are 12 chains in PDB entry 5JGH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 27LEU 182
B
 T 1 A 22
C
 T 1 A 22
D
 LYS 27PRO 181
E
 T 1 A 22
F
 T 1 A 22
G
 LYS 27LEU 182
H
 T 1 A 22
I
 T 1 A 22
J
 ARG 31PRO 181
K
 T 1 A 22
L
 T 1 A 22
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 5JGH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
29 41Right-handed alpha
Helix 2
AA2
A
48 65Right-handed alpha
Helix 3
AA3
A
69 83Right-handed alpha
Helix 4
AA4
A
85 114Right-handed alpha
Helix 5
AA5
A
121 138Right-handed alpha
Helix 6
AA6
A
142 157Right-handed alpha
Helix 7
AA7
A
158 180Right-handed alpha
Helix 8
AA8
D
29 41Right-handed alpha
Helix 9
AA9
D
48 65Right-handed alpha
Helix 10
AB1
D
69 84Right-handed alpha
Helix 11
AB2
D
85 114Right-handed alpha
Helix 12
AB3
D
121 138Right-handed alpha
Helix 13
AB4
D
142 157Right-handed alpha
Helix 14
AB5
D
158 180Right-handed alpha
Helix 15
AB6
G
29 41Right-handed alpha
Helix 16
AB7
G
48 65Right-handed alpha
Helix 17
AB8
G
69 83Right-handed alpha
Helix 18
AB9
G
85 114Right-handed alpha
Helix 19
AC1
G
121 138Right-handed alpha
Helix 20
AC2
G
142 157Right-handed alpha
Helix 21
AC3
G
158 180Right-handed alpha
Helix 22
AC4
J
32 41Right-handed alpha
Helix 23
AC5
J
48 65Right-handed alpha
Helix 24
AC6
J
69 84Right-handed alpha
Helix 25
AC7
J
85 113Right-handed alpha
Helix 26
AC8
J
121 138Right-handed alpha
Helix 27
AC9
J
142 157Right-handed alpha
Helix 28
AD1
J
158 177Right-handed alpha
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There are no sheets in PDB entry 5JGH
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