Analysis of interatomic Contacts of Structural Units in PDB entry:
5JHP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5JHP entry

There are 5 chains in PDB entry 5JHP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 2ASP 201
B
 SER 2ASN 180
C
 SER 2ASP 201
D
 SER 2GLN 184
E
 ASP 794ASN 802
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 46 helices in PDB entry 5JHP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 19Right-handed alpha
Helix 2
AA2
A
21 33Right-handed alpha
Helix 3
AA3
A
37 48Right-handed alpha
Helix 4
AA4
A
49 58Right-handed alpha
Helix 5
AA5
A
66 87Right-handed alpha
Helix 6
AA6
A
89 100Right-handed alpha
Helix 7
AA7
A
101 105Right-handed 310
Helix 8
AA8
A
108 118Right-handed alpha
Helix 9
AA9
A
123 131Right-handed 310
Helix 10
AB1
A
135 153Right-handed alpha
Helix 11
AB2
A
169 181Right-handed alpha
Helix 12
AB3
B
3 19Right-handed alpha
Helix 13
AB4
B
21 33Right-handed alpha
Helix 14
AB5
B
37 48Right-handed alpha
Helix 15
AB6
B
49 59Right-handed alpha
Helix 16
AB7
B
66 87Right-handed alpha
Helix 17
AB8
B
89 100Right-handed alpha
Helix 18
AB9
B
101 105Right-handed 310
Helix 19
AC1
B
108 117Right-handed alpha
Helix 20
AC2
B
118 121Right-handed 310
Helix 21
AC3
B
123 127Right-handed 310
Helix 22
AC4
B
135 154Right-handed alpha
Helix 23
AC5
B
154 159Right-handed alpha
Helix 24
AC6
B
169 180Right-handed alpha
Helix 25
AC7
C
3 19Right-handed alpha
Helix 26
AC8
C
21 33Right-handed alpha
Helix 27
AC9
C
37 48Right-handed alpha
Helix 28
AD1
C
49 58Right-handed alpha
Helix 29
AD2
C
66 87Right-handed alpha
Helix 30
AD3
C
89 100Right-handed alpha
Helix 31
AD4
C
101 105Right-handed 310
Helix 32
AD5
C
108 117Right-handed alpha
Helix 33
AD6
C
123 131Right-handed 310
Helix 34
AD7
C
135 154Right-handed alpha
Helix 35
AD8
C
169 182Right-handed alpha
Helix 36
AD9
D
3 19Right-handed alpha
Helix 37
AE1
D
21 33Right-handed alpha
Helix 38
AE2
D
37 48Right-handed alpha
Helix 39
AE3
D
49 58Right-handed alpha
Helix 40
AE4
D
66 87Right-handed alpha
Helix 41
AE5
D
89 100Right-handed alpha
Helix 42
AE6
D
101 105Right-handed 310
Helix 43
AE7
D
108 117Right-handed alpha
Helix 44
AE8
D
123 131Right-handed 310
Helix 45
AE9
D
135 154Right-handed alpha
Helix 46
AF1
D
169 181Right-handed alpha
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There are no sheets in PDB entry 5JHP
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