Analysis of interatomic Contacts of Structural Units in PDB entry:
5JO8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5JO8 entry

There is 1 chain in PDB entry 5JO8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 22ILE 277
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 5JO8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
27 34Right-handed alpha
Helix 2
AA2
A
34 42Right-handed alpha
Helix 3
AA3
A
42 50Right-handed alpha
Helix 4
AA4
A
53 70Right-handed alpha
Helix 5
AA5
A
76 95Right-handed alpha
Helix 6
AA6
A
99 116Right-handed alpha
Helix 7
AA7
A
116 122Right-handed alpha
Helix 8
AA8
A
124 143Right-handed alpha
Helix 9
AA9
A
147 164Right-handed alpha
Helix 10
AB1
A
167 171Right-handed 310
Helix 11
AB2
A
172 178Right-handed alpha
Helix 12
AB3
A
186 205Right-handed alpha
Helix 13
AB4
A
212 224Right-handed alpha
Helix 14
AB5
A
228 246Right-handed alpha
Helix 15
AB6
A
246 254Right-handed alpha
Helix 16
AB7
A
260 263Right-handed 310
Helix 17
AB8
A
264 277Right-handed alpha
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There are no sheets in PDB entry 5JO8
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