Analysis of interatomic Contacts of Structural Units in PDB entry:
5JPZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5JPZ entry

There are 2 chains in PDB entry 5JPZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 92ALA 574
B
 ALA 90ALA 574
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 55 helices in PDB entry 5JPZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
92 108Right-handed alpha
Helix 2
AA2
A
111 125Right-handed alpha
Helix 3
AA3
A
127 142Right-handed alpha
Helix 4
AA4
A
145 158Right-handed alpha
Helix 5
AA5
A
162 179Right-handed alpha
Helix 6
AA6
A
182 194Right-handed alpha
Helix 7
AA7
A
195 197Right-handed 310
Helix 8
AA8
A
202 218Right-handed alpha
Helix 9
AA9
A
223 238Right-handed alpha
Helix 10
AB1
A
244 256Right-handed alpha
Helix 11
AB2
A
261 273Right-handed alpha
Helix 12
AB3
A
278 305Right-handed alpha
Helix 13
AB4
A
309 324Right-handed alpha
Helix 14
AB5
A
325 340Right-handed alpha
Helix 15
AB6
A
343 357Right-handed alpha
Helix 16
AB7
A
360 375Right-handed alpha
Helix 17
AB8
A
378 392Right-handed alpha
Helix 18
AB9
A
395 409Right-handed alpha
Helix 19
AC1
A
413 430Right-handed alpha
Helix 20
AC2
A
439 465Right-handed alpha
Helix 21
AC3
A
472 485Right-handed alpha
Helix 22
AC4
A
489 501Right-handed alpha
Helix 23
AC5
A
502 506Right-handed 310
Helix 24
AC6
A
507 522Right-handed alpha
Helix 25
AC7
A
523 538Right-handed alpha
Helix 26
AC8
A
541 557Right-handed alpha
Helix 27
AC9
A
558 574Right-handed alpha
Helix 28
AD1
B
92 108Right-handed alpha
Helix 29
AD2
B
111 125Right-handed alpha
Helix 30
AD3
B
127 142Right-handed alpha
Helix 31
AD4
B
145 158Right-handed alpha
Helix 32
AD5
B
162 177Right-handed alpha
Helix 33
AD6
B
182 195Right-handed alpha
Helix 34
AD7
B
202 218Right-handed alpha
Helix 35
AD8
B
223 239Right-handed alpha
Helix 36
AD9
B
240 243Right-handed 310
Helix 37
AE1
B
244 256Right-handed alpha
Helix 38
AE2
B
261 271Right-handed alpha
Helix 39
AE3
B
278 305Right-handed alpha
Helix 40
AE4
B
309 324Right-handed alpha
Helix 41
AE5
B
325 340Right-handed alpha
Helix 42
AE6
B
343 358Right-handed alpha
Helix 43
AE7
B
360 375Right-handed alpha
Helix 44
AE8
B
378 392Right-handed alpha
Helix 45
AE9
B
395 409Right-handed alpha
Helix 46
AF1
B
413 430Right-handed alpha
Helix 47
AF2
B
439 458Right-handed alpha
Helix 48
AF3
B
458 465Right-handed alpha
Helix 49
AF4
B
472 487Right-handed alpha
Helix 50
AF5
B
488 502Right-handed alpha
Helix 51
AF6
B
503 506Right-handed 310
Helix 52
AF7
B
507 522Right-handed alpha
Helix 53
AF8
B
523 538Right-handed alpha
Helix 54
AF9
B
541 557Right-handed alpha
Helix 55
AG1
B
558 574Right-handed alpha
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There are no sheets in PDB entry 5JPZ
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il