Analysis of interatomic Contacts of Structural Units in PDB entry:
5JSB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5JSB entry

There are 10 chains in PDB entry 5JSB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 172GLU 322
B
 ASP 2GLY 117
C
 ASP 172GLU 322
D
 ASP 2GLY 117
E
 ASP 172GLU 322
F
 ASP 2GLY 117
G
 ASP 172GLU 322
H
 ASP 2GLY 117
I
 ASP 172GLU 322
J
 ASP 2LYS 11
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 66 helices in PDB entry 5JSB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
172 192Right-handed alpha
Helix 2
AA2
A
204 224Right-handed alpha
Helix 3
AA3
A
224 236Right-handed alpha
Helix 4
AA4
A
240 255Right-handed alpha
Helix 5
AA5
A
260 281Right-handed alpha
Helix 6
AA6
A
282 285Right-handed 310
Helix 7
AA7
A
286 309Right-handed alpha
Helix 8
AA8
A
310 320Right-handed alpha
Helix 9
AA9
B
3 35Right-handed alpha
Helix 10
AB1
B
38 77Right-handed alpha
Helix 11
AB2
B
81 116Right-handed alpha
Helix 12
AB3
C
173 192Right-handed alpha
Helix 13
AB4
C
204 224Right-handed alpha
Helix 14
AB5
C
224 236Right-handed alpha
Helix 15
AB6
C
240 255Right-handed alpha
Helix 16
AB7
C
260 281Right-handed alpha
Helix 17
AB8
C
283 285Right-handed 310
Helix 18
AB9
C
286 309Right-handed alpha
Helix 19
AC1
C
310 320Right-handed alpha
Helix 20
AC2
D
3 35Right-handed alpha
Helix 21
AC3
D
38 77Right-handed alpha
Helix 22
AC4
D
81 116Right-handed alpha
Helix 23
AC5
E
173 192Right-handed alpha
Helix 24
AC6
E
202 224Right-handed alpha
Helix 25
AC7
E
224 236Right-handed alpha
Helix 26
AC8
E
240 255Right-handed alpha
Helix 27
AC9
E
260 281Right-handed alpha
Helix 28
AD1
E
282 285Right-handed 310
Helix 29
AD2
E
286 309Right-handed alpha
Helix 30
AD3
E
310 320Right-handed alpha
Helix 31
AD4
F
3 35Right-handed alpha
Helix 32
AD5
F
38 77Right-handed alpha
Helix 33
AD6
F
81 117Right-handed alpha
Helix 34
AD7
G
173 192Right-handed alpha
Helix 35
AD8
G
202 224Right-handed alpha
Helix 36
AD9
G
224 236Right-handed alpha
Helix 37
AE1
G
240 255Right-handed alpha
Helix 38
AE2
G
260 281Right-handed alpha
Helix 39
AE3
G
282 285Right-handed 310
Helix 40
AE4
G
286 309Right-handed alpha
Helix 41
AE5
G
310 320Right-handed alpha
Helix 42
AE6
H
3 35Right-handed alpha
Helix 43
AE7
H
38 77Right-handed alpha
Helix 44
AE8
H
81 117Right-handed alpha
Helix 45
AE9
I
173 192Right-handed alpha
Helix 46
AF1
I
202 224Right-handed alpha
Helix 47
AF2
I
224 236Right-handed alpha
Helix 48
AF3
I
240 255Right-handed alpha
Helix 49
AF4
I
260 281Right-handed alpha
Helix 50
AF5
I
282 285Right-handed 310
Helix 51
AF6
I
286 309Right-handed alpha
Helix 52
AF7
I
310 320Right-handed alpha
Helix 53
AF8
J
3 35Right-handed alpha
Helix 54
AF9
J
38 77Right-handed alpha
Helix 55
AG1
J
81 116Right-handed alpha
Helix 56
AG2
K
173 192Right-handed alpha
Helix 57
AG3
K
204 224Right-handed alpha
Helix 58
AG4
K
224 236Right-handed alpha
Helix 59
AG5
K
240 255Right-handed alpha
Helix 60
AG6
K
260 281Right-handed alpha
Helix 61
AG7
K
283 285Right-handed 310
Helix 62
AG8
K
286 309Right-handed alpha
Helix 63
AG9
K
310 320Right-handed alpha
Helix 64
AH1
L
3 35Right-handed alpha
Helix 65
AH2
L
38 77Right-handed alpha
Helix 66
AH3
L
81 117Right-handed alpha
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There are no sheets in PDB entry 5JSB
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