Analysis of interatomic Contacts of Structural Units in PDB entry:
5JTI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5JTI entry

There are 6 chains in PDB entry 5JTI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 1027GLY 1089
B
 LEU 1027GLY 1088
C
 ASP 1028LEU 1087
D
 ASN 1030GLY 1088
E
 ASP 1028LEU 1087
F
 MET 1029LEU 1087
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 5JTI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1027 1038Right-handed alpha
Helix 2
AA2
A
1040 1042Right-handed 310
Helix 3
AA3
A
1043 1050Right-handed alpha
Helix 4
AA4
A
1053 1058Right-handed alpha
Helix 5
AA5
A
1061 1068Right-handed alpha
Helix 6
AA6
A
1072 1089Right-handed alpha
Helix 7
AA7
B
1030 1038Right-handed alpha
Helix 8
AA8
B
1040 1042Right-handed 310
Helix 9
AA9
B
1043 1050Right-handed alpha
Helix 10
AB1
B
1053 1058Right-handed alpha
Helix 11
AB2
B
1061 1068Right-handed alpha
Helix 12
AB3
B
1072 1088Right-handed alpha
Helix 13
AB4
C
1030 1038Right-handed alpha
Helix 14
AB5
C
1040 1042Right-handed 310
Helix 15
AB6
C
1043 1050Right-handed alpha
Helix 16
AB7
C
1053 1058Right-handed alpha
Helix 17
AB8
C
1061 1068Right-handed alpha
Helix 18
AB9
C
1072 1087Right-handed alpha
Helix 19
AC1
D
1031 1039Right-handed alpha
Helix 20
AC2
D
1040 1042Right-handed 310
Helix 21
AC3
D
1043 1050Right-handed alpha
Helix 22
AC4
D
1053 1058Right-handed alpha
Helix 23
AC5
D
1061 1068Right-handed alpha
Helix 24
AC6
D
1072 1087Right-handed alpha
Helix 25
AC7
E
1031 1038Right-handed alpha
Helix 26
AC8
E
1040 1042Right-handed 310
Helix 27
AC9
E
1043 1050Right-handed alpha
Helix 28
AD1
E
1053 1058Right-handed alpha
Helix 29
AD2
E
1061 1068Right-handed alpha
Helix 30
AD3
E
1072 1087Right-handed alpha
Helix 31
AD4
F
1031 1036Right-handed alpha
Helix 32
AD5
F
1040 1042Right-handed 310
Helix 33
AD6
F
1043 1050Right-handed alpha
Helix 34
AD7
F
1053 1058Right-handed alpha
Helix 35
AD8
F
1061 1068Right-handed alpha
Helix 36
AD9
F
1072 1087Right-handed alpha
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There are no sheets in PDB entry 5JTI
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