Analysis of interatomic Contacts of Structural Units in PDB entry:
5JUB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5JUB entry

There are 6 chains in PDB entry 5JUB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 3GLY 300
B
 SER 6LEU 299
C
 LEU 17LEU 24
D
 LEU 17LEU 24
X
 G 3 T 19
Z
 A 2 C 18
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 38 helices in PDB entry 5JUB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
3 18Right-handed alpha
Helix 2
AA2
A
21 27Right-handed alpha
Helix 3
AA3
A
33 42Right-handed alpha
Helix 4
AA4
A
48 59Right-handed alpha
Helix 5
AA5
A
62 67Right-handed alpha
Helix 6
AA6
A
75 88Right-handed alpha
Helix 7
AA7
A
93 112Right-handed alpha
Helix 8
AA8
A
116 132Right-handed alpha
Helix 9
AA9
A
140 145Right-handed alpha
Helix 10
AB1
A
145 153Right-handed alpha
Helix 11
AB2
A
159 174Right-handed alpha
Helix 12
AB3
A
180 192Right-handed alpha
Helix 13
AB4
A
199 221Right-handed alpha
Helix 14
AB5
A
225 241Right-handed alpha
Helix 15
AB6
A
242 244Right-handed 310
Helix 16
AB7
A
245 260Right-handed alpha
Helix 17
AB8
A
263 281Right-handed alpha
Helix 18
AB9
A
283 297Right-handed alpha
Helix 19
AC1
B
7 18Right-handed alpha
Helix 20
AC2
B
21 27Right-handed alpha
Helix 21
AC3
B
33 42Right-handed alpha
Helix 22
AC4
B
48 60Right-handed alpha
Helix 23
AC5
B
62 68Right-handed alpha
Helix 24
AC6
B
75 88Right-handed alpha
Helix 25
AC7
B
93 112Right-handed alpha
Helix 26
AC8
B
116 131Right-handed alpha
Helix 27
AC9
B
140 145Right-handed alpha
Helix 28
AD1
B
145 155Right-handed alpha
Helix 29
AD2
B
159 174Right-handed alpha
Helix 30
AD3
B
180 194Right-handed alpha
Helix 31
AD4
B
199 221Right-handed alpha
Helix 32
AD5
B
225 241Right-handed alpha
Helix 33
AD6
B
242 244Right-handed 310
Helix 34
AD7
B
245 260Right-handed alpha
Helix 35
AD8
B
263 281Right-handed alpha
Helix 36
AD9
B
283 297Right-handed alpha
Helix 37
AE1
C
18 22Right-handed 310
Helix 38
AE2
D
18 22Right-handed 310
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There are no sheets in PDB entry 5JUB
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