Analysis of interatomic Contacts of Structural Units in PDB entry:
5JV0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5JV0 entry

There is 1 chain in PDB entry 5JV0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
F
 ASP 8LYS 350
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 21 helices in PDB entry 5JV0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
F
10 29Right-handed alpha
Helix 2
AA2
F
35 37Right-handed 310
Helix 3
AA3
F
38 53Right-handed alpha
Helix 4
AA4
F
58 72Right-handed alpha
Helix 5
AA5
F
73 77Right-handed 310
Helix 6
AA6
F
78 108Right-handed alpha
Helix 7
AA7
F
117 121Right-handed 310
Helix 8
AA8
F
124 126Right-handed 310
Helix 9
AA9
F
127 148Right-handed alpha
Helix 10
AB1
F
152 178Right-handed alpha
Helix 11
AB2
F
184 188Right-handed 310
Helix 12
AB3
F
189 201Right-handed alpha
Helix 13
AB4
F
201 206Right-handed alpha
Helix 14
AB5
F
206 217Right-handed alpha
Helix 15
AB6
F
221 250Right-handed alpha
Helix 16
AB7
F
251 256Right-handed alpha
Helix 17
AB8
F
268 278Right-handed alpha
Helix 18
AB9
F
279 290Right-handed alpha
Helix 19
AC1
F
294 308Right-handed alpha
Helix 20
AC2
F
309 333Right-handed alpha
Helix 21
AC3
F
338 349Right-handed alpha
Back to top of page
There are no sheets in PDB entry 5JV0
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il