Analysis of interatomic Contacts of Structural Units in PDB entry:
5JXR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5JXR entry

There are 2 chains in PDB entry 5JXR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 87PHE 719
B
 SER 87PHE 719
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 64 helices in PDB entry 5JXR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
87 100Right-handed alpha
Helix 2
AA2
A
104 112Right-handed alpha
Helix 3
AA3
A
115 135Right-handed alpha
Helix 4
AA4
A
153 166Right-handed alpha
Helix 5
AA5
A
187 203Right-handed alpha
Helix 6
AA6
A
216 231Right-handed alpha
Helix 7
AA7
A
243 245Right-handed 310
Helix 8
AA8
A
246 258Right-handed alpha
Helix 9
AA9
A
269 280Right-handed alpha
Helix 10
AB1
A
293 299Right-handed alpha
Helix 11
AB2
A
299 304Right-handed alpha
Helix 12
AB3
A
326 332Right-handed alpha
Helix 13
AB4
A
349 361Right-handed alpha
Helix 14
AB5
A
367 378Right-handed alpha
Helix 15
AB6
A
381 394Right-handed alpha
Helix 16
AB7
A
401 407Right-handed alpha
Helix 17
AB8
A
422 435Right-handed alpha
Helix 18
AB9
A
436 442Right-handed alpha
Helix 19
AC1
A
449 466Right-handed alpha
Helix 20
AC2
A
467 470Right-handed 310
Helix 21
AC3
A
483 488Right-handed alpha
Helix 22
AC4
A
489 505Right-handed alpha
Helix 23
AC5
A
515 529Right-handed alpha
Helix 24
AC6
A
544 554Right-handed alpha
Helix 25
AC7
A
567 571Right-handed 310
Helix 26
AC8
A
589 598Right-handed alpha
Helix 27
AC9
A
619 650Right-handed alpha
Helix 28
AD1
A
653 663Right-handed alpha
Helix 29
AD2
A
664 671Right-handed alpha
Helix 30
AD3
A
675 680Right-handed alpha
Helix 31
AD4
A
686 710Right-handed alpha
Helix 32
AD5
A
712 717Right-handed alpha
Helix 33
AD6
B
88 100Right-handed alpha
Helix 34
AD7
B
104 112Right-handed alpha
Helix 35
AD8
B
115 135Right-handed alpha
Helix 36
AD9
B
153 166Right-handed alpha
Helix 37
AE1
B
187 203Right-handed alpha
Helix 38
AE2
B
216 231Right-handed alpha
Helix 39
AE3
B
243 245Right-handed 310
Helix 40
AE4
B
246 258Right-handed alpha
Helix 41
AE5
B
269 280Right-handed alpha
Helix 42
AE6
B
293 299Right-handed alpha
Helix 43
AE7
B
299 304Right-handed alpha
Helix 44
AE8
B
326 332Right-handed alpha
Helix 45
AE9
B
349 361Right-handed alpha
Helix 46
AF1
B
367 378Right-handed alpha
Helix 47
AF2
B
381 394Right-handed alpha
Helix 48
AF3
B
401 407Right-handed alpha
Helix 49
AF4
B
422 435Right-handed alpha
Helix 50
AF5
B
436 442Right-handed alpha
Helix 51
AF6
B
449 466Right-handed alpha
Helix 52
AF7
B
467 470Right-handed 310
Helix 53
AF8
B
483 488Right-handed alpha
Helix 54
AF9
B
489 505Right-handed alpha
Helix 55
AG1
B
515 529Right-handed alpha
Helix 56
AG2
B
544 554Right-handed alpha
Helix 57
AG3
B
567 571Right-handed 310
Helix 58
AG4
B
589 598Right-handed alpha
Helix 59
AG5
B
619 650Right-handed alpha
Helix 60
AG6
B
653 663Right-handed alpha
Helix 61
AG7
B
664 671Right-handed alpha
Helix 62
AG8
B
675 680Right-handed alpha
Helix 63
AG9
B
686 710Right-handed alpha
Helix 64
AH1
B
712 717Right-handed alpha
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There are 4 sheets in PDB entry 5JXR. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
263 266first strand
Strand 2
A
288 292parallel
Strand 3
A
238 242parallel
Strand 4
A
308 314parallel
Strand 5
A
335 341parallel
Strand 6
A
207 209parallel
Strand 7
A
397 398parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
413 419first strand
Strand 2
A
610 616parallel
Strand 3
A
580 583parallel
Strand 4
A
509 513parallel
Strand 5
A
561 565parallel
Strand 6
A
533 536parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
263 266first strand
Strand 2
B
288 292parallel
Strand 3
B
238 242parallel
Strand 4
B
307 314parallel
Strand 5
B
334 341parallel
Strand 6
B
207 209parallel
Strand 7
B
397 398parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
413 419first strand
Strand 2
B
610 616parallel
Strand 3
B
580 583parallel
Strand 4
B
509 513parallel
Strand 5
B
561 565parallel
Strand 6
B
533 536parallel
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