Analysis of interatomic Contacts of Structural Units in PDB entry:
5JXT

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5JXT entry

There are 23 chains in PDB entry 5JXT (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
B	LYS 407	ALA 734
E	LYS 407	PHE 719
F	LYS 407	ALA 734
G	LYS 407	ASP 714
J	SER 408	GLU 726
N	SER 408	ASP 731
O	SER 408	ASP 731
P	SER 408	ASP 731
R	GLY 14	HIS 18
S	GLY 14	HIS 18
U	GLY 14	HIS 18
C	LYS 407	ALA 734
H	SER 408	PHE 732
K	SER 408	LEU 716
L	LYS 407	GLN 717
A	LYS 407	ALA 733
I	SER 408	LEU 716
D	LYS 407	ILE 713
M	SER 408	PHE 732
Q	GLY 14	HIS 18
T	GLY 14	HIS 18
V	GLY 14	HIS 18
W	ALA 15	HIS 18

There are250 helices in PDB entry 5JXT. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	B	422	435	Right-handed alpha
Helix 2	AA2	B	436	442	Right-handed alpha
Helix 3	AA3	B	449	466	Right-handed alpha
Helix 4	AA4	B	467	470	Right-handed 310
Helix 5	AA5	B	483	488	Right-handed alpha
Helix 6	AA6	B	489	505	Right-handed alpha
Helix 7	AA7	B	515	530	Right-handed alpha
Helix 8	AA8	B	541	547	Right-handed alpha
Helix 9	AA9	B	548	553	Right-handed alpha
Helix 10	AB1	B	589	598	Right-handed alpha
Helix 11	AB2	B	619	650	Right-handed alpha
Helix 12	AB3	B	653	663	Right-handed alpha
Helix 13	AB4	B	664	671	Right-handed alpha
Helix 14	AB5	B	676	681	Right-handed alpha
Helix 15	AB6	B	686	709	Right-handed alpha
Helix 16	AB7	E	422	435	Right-handed alpha
Helix 17	AB8	E	436	442	Right-handed alpha
Helix 18	AB9	E	445	466	Right-handed alpha
Helix 19	AC1	E	467	470	Right-handed 310
Helix 20	AC2	E	483	488	Right-handed alpha
Helix 21	AC3	E	489	505	Right-handed alpha
Helix 22	AC4	E	515	530	Right-handed alpha
Helix 23	AC5	E	541	554	Right-handed alpha
Helix 24	AC6	E	567	569	Right-handed 310
Helix 25	AC7	E	589	598	Right-handed alpha
Helix 26	AC8	E	619	650	Right-handed alpha
Helix 27	AC9	E	653	663	Right-handed alpha
Helix 28	AD1	E	664	671	Right-handed alpha
Helix 29	AD2	E	676	681	Right-handed alpha
Helix 30	AD3	E	686	710	Right-handed alpha
Helix 31	AD4	E	712	719	Right-handed 310
Helix 32	AD5	F	422	435	Right-handed alpha
Helix 33	AD6	F	436	442	Right-handed alpha
Helix 34	AD7	F	449	466	Right-handed alpha
Helix 35	AD8	F	467	470	Right-handed 310
Helix 36	AD9	F	483	488	Right-handed alpha
Helix 37	AE1	F	489	505	Right-handed alpha
Helix 38	AE2	F	515	530	Right-handed alpha
Helix 39	AE3	F	541	554	Right-handed alpha
Helix 40	AE4	F	589	598	Right-handed alpha
Helix 41	AE5	F	619	650	Right-handed alpha
Helix 42	AE6	F	653	663	Right-handed alpha
Helix 43	AE7	F	664	671	Right-handed alpha
Helix 44	AE8	F	676	681	Right-handed alpha
Helix 45	AE9	F	686	710	Right-handed alpha
Helix 46	AF1	G	422	435	Right-handed alpha
Helix 47	AF2	G	436	442	Right-handed alpha
Helix 48	AF3	G	445	466	Right-handed alpha
Helix 49	AF4	G	467	470	Right-handed 310
Helix 50	AF5	G	483	488	Right-handed alpha
Helix 51	AF6	G	489	505	Right-handed alpha
Helix 52	AF7	G	515	530	Right-handed alpha
Helix 53	AF8	G	541	554	Right-handed alpha
Helix 54	AF9	G	567	570	Right-handed 310
Helix 55	AG1	G	589	598	Right-handed alpha
Helix 56	AG2	G	619	650	Right-handed alpha
Helix 57	AG3	G	653	663	Right-handed alpha
Helix 58	AG4	G	664	671	Right-handed alpha
Helix 59	AG5	G	676	681	Right-handed alpha
Helix 60	AG6	G	686	710	Right-handed alpha
Helix 61	AG7	J	422	436	Right-handed alpha
Helix 62	AG8	J	436	441	Right-handed alpha
Helix 63	AG9	J	450	466	Right-handed alpha
Helix 64	AH1	J	467	470	Right-handed 310
Helix 65	AH2	J	483	488	Right-handed alpha
Helix 66	AH3	J	489	505	Right-handed alpha
Helix 67	AH4	J	515	529	Right-handed alpha
Helix 68	AH5	J	541	554	Right-handed alpha
Helix 69	AH6	J	589	598	Right-handed alpha
Helix 70	AH7	J	619	641	Right-handed alpha
Helix 71	AH8	J	643	648	Right-handed alpha
Helix 72	AH9	J	653	663	Right-handed alpha
Helix 73	AI1	J	664	671	Right-handed alpha
Helix 74	AI2	J	675	682	Right-handed alpha
Helix 75	AI3	J	686	709	Right-handed alpha
Helix 76	AI4	J	712	717	Right-handed alpha
Helix 77	AI5	J	719	724	Right-handed 310
Helix 78	AI6	N	422	436	Right-handed alpha
Helix 79	AI7	N	436	441	Right-handed alpha
Helix 80	AI8	N	450	466	Right-handed alpha
Helix 81	AI9	N	467	470	Right-handed 310
Helix 82	AJ1	N	483	488	Right-handed alpha
Helix 83	AJ2	N	489	505	Right-handed alpha
Helix 84	AJ3	N	515	530	Right-handed alpha
Helix 85	AJ4	N	541	554	Right-handed alpha
Helix 86	AJ5	N	589	598	Right-handed alpha
Helix 87	AJ6	N	619	641	Right-handed alpha
Helix 88	AJ7	N	643	650	Right-handed alpha
Helix 89	AJ8	N	653	663	Right-handed alpha
Helix 90	AJ9	N	664	671	Right-handed alpha
Helix 91	AK1	N	675	680	Right-handed alpha
Helix 92	AK2	N	687	709	Right-handed alpha
Helix 93	AK3	N	712	717	Right-handed alpha
Helix 94	AK4	N	719	724	Right-handed 310
Helix 95	AK5	O	422	435	Right-handed alpha
Helix 96	AK6	O	436	442	Right-handed alpha
Helix 97	AK7	O	450	466	Right-handed alpha
Helix 98	AK8	O	467	470	Right-handed 310
Helix 99	AK9	O	483	488	Right-handed alpha
Helix 100	AL1	O	489	503	Right-handed alpha
Helix 101	AL2	O	515	529	Right-handed alpha
Helix 102	AL3	O	541	554	Right-handed alpha
Helix 103	AL4	O	567	570	Right-handed 310
Helix 104	AL5	O	589	598	Right-handed alpha
Helix 105	AL6	O	619	641	Right-handed alpha
Helix 106	AL7	O	643	650	Right-handed alpha
Helix 107	AL8	O	653	663	Right-handed alpha
Helix 108	AL9	O	664	671	Right-handed alpha
Helix 109	AM1	O	675	681	Right-handed alpha
Helix 110	AM2	O	686	710	Right-handed alpha
Helix 111	AM3	O	712	717	Right-handed alpha
Helix 112	AM4	O	719	724	Right-handed 310
Helix 113	AM5	P	422	436	Right-handed alpha
Helix 114	AM6	P	436	441	Right-handed alpha
Helix 115	AM7	P	450	466	Right-handed alpha
Helix 116	AM8	P	467	470	Right-handed 310
Helix 117	AM9	P	483	488	Right-handed alpha
Helix 118	AN1	P	489	505	Right-handed alpha
Helix 119	AN2	P	515	530	Right-handed alpha
Helix 120	AN3	P	541	554	Right-handed alpha
Helix 121	AN4	P	566	570	Right-handed alpha
Helix 122	AN5	P	589	598	Right-handed alpha
Helix 123	AN6	P	619	641	Right-handed alpha
Helix 124	AN7	P	642	647	Right-handed alpha
Helix 125	AN8	P	653	663	Right-handed alpha
Helix 126	AN9	P	664	671	Right-handed alpha
Helix 127	AO1	P	687	709	Right-handed alpha
Helix 128	AO2	P	712	717	Right-handed alpha
Helix 129	AO3	P	719	724	Right-handed 310
Helix 130	AO4	C	422	436	Right-handed alpha
Helix 131	AO5	C	436	442	Right-handed alpha
Helix 132	AO6	C	449	466	Right-handed alpha
Helix 133	AO7	C	467	470	Right-handed 310
Helix 134	AO8	C	483	488	Right-handed alpha
Helix 135	AO9	C	489	505	Right-handed alpha
Helix 136	AP1	C	515	530	Right-handed alpha
Helix 137	AP2	C	541	554	Right-handed alpha
Helix 138	AP3	C	589	598	Right-handed alpha
Helix 139	AP4	C	619	650	Right-handed alpha
Helix 140	AP5	C	653	663	Right-handed alpha
Helix 141	AP6	C	664	671	Right-handed alpha
Helix 142	AP7	C	676	681	Right-handed alpha
Helix 143	AP8	C	686	710	Right-handed alpha
Helix 144	AP9	H	422	435	Right-handed alpha
Helix 145	AQ1	H	436	441	Right-handed alpha
Helix 146	AQ2	H	450	466	Right-handed alpha
Helix 147	AQ3	H	467	470	Right-handed 310
Helix 148	AQ4	H	483	488	Right-handed alpha
Helix 149	AQ5	H	489	505	Right-handed alpha
Helix 150	AQ6	H	515	529	Right-handed alpha
Helix 151	AQ7	H	541	554	Right-handed alpha
Helix 152	AQ8	H	589	598	Right-handed alpha
Helix 153	AQ9	H	619	641	Right-handed alpha
Helix 154	AR1	H	642	648	Right-handed alpha
Helix 155	AR2	H	653	662	Right-handed alpha
Helix 156	AR3	H	664	671	Right-handed alpha
Helix 157	AR4	H	675	682	Right-handed alpha
Helix 158	AR5	H	687	710	Right-handed alpha
Helix 159	AR6	H	712	717	Right-handed alpha
Helix 160	AR7	K	422	436	Right-handed alpha
Helix 161	AR8	K	436	441	Right-handed alpha
Helix 162	AR9	K	450	466	Right-handed alpha
Helix 163	AS1	K	467	470	Right-handed 310
Helix 164	AS2	K	483	488	Right-handed alpha
Helix 165	AS3	K	489	505	Right-handed alpha
Helix 166	AS4	K	515	530	Right-handed alpha
Helix 167	AS5	K	541	554	Right-handed alpha
Helix 168	AS6	K	566	570	Right-handed alpha
Helix 169	AS7	K	589	598	Right-handed alpha
Helix 170	AS8	K	619	642	Right-handed alpha
Helix 171	AS9	K	643	650	Right-handed alpha
Helix 172	AT1	K	653	663	Right-handed alpha
Helix 173	AT2	K	664	671	Right-handed alpha
Helix 174	AT3	K	675	680	Right-handed alpha
Helix 175	AT4	K	686	710	Right-handed alpha
Helix 176	AT5	L	422	435	Right-handed alpha
Helix 177	AT6	L	436	442	Right-handed alpha
Helix 178	AT7	L	445	466	Right-handed alpha
Helix 179	AT8	L	467	470	Right-handed 310
Helix 180	AT9	L	483	488	Right-handed alpha
Helix 181	AU1	L	489	505	Right-handed alpha
Helix 182	AU2	L	515	530	Right-handed alpha
Helix 183	AU3	L	541	554	Right-handed alpha
Helix 184	AU4	L	589	598	Right-handed alpha
Helix 185	AU5	L	619	650	Right-handed alpha
Helix 186	AU6	L	653	663	Right-handed alpha
Helix 187	AU7	L	664	671	Right-handed alpha
Helix 188	AU8	L	675	681	Right-handed alpha
Helix 189	AU9	L	686	711	Right-handed alpha
Helix 190	AV1	A	422	435	Right-handed alpha
Helix 191	AV2	A	436	442	Right-handed alpha
Helix 192	AV3	A	445	466	Right-handed alpha
Helix 193	AV4	A	467	470	Right-handed 310
Helix 194	AV5	A	483	488	Right-handed alpha
Helix 195	AV6	A	489	505	Right-handed alpha
Helix 196	AV7	A	515	530	Right-handed alpha
Helix 197	AV8	A	541	554	Right-handed alpha
Helix 198	AV9	A	567	569	Right-handed 310
Helix 199	AW1	A	589	598	Right-handed alpha
Helix 200	AW2	A	619	650	Right-handed alpha
Helix 201	AW3	A	653	663	Right-handed alpha
Helix 202	AW4	A	664	671	Right-handed alpha
Helix 203	AW5	A	676	681	Right-handed alpha
Helix 204	AW6	A	686	710	Right-handed alpha
Helix 205	AW7	I	422	435	Right-handed alpha
Helix 206	AW8	I	436	441	Right-handed alpha
Helix 207	AW9	I	450	466	Right-handed alpha
Helix 208	AX1	I	467	470	Right-handed 310
Helix 209	AX2	I	483	488	Right-handed alpha
Helix 210	AX3	I	489	505	Right-handed alpha
Helix 211	AX4	I	515	530	Right-handed alpha
Helix 212	AX5	I	541	554	Right-handed alpha
Helix 213	AX6	I	566	570	Right-handed alpha
Helix 214	AX7	I	589	598	Right-handed alpha
Helix 215	AX8	I	619	641	Right-handed alpha
Helix 216	AX9	I	641	649	Right-handed alpha
Helix 217	AY1	I	653	663	Right-handed alpha
Helix 218	AY2	I	664	670	Right-handed alpha
Helix 219	AY3	I	688	710	Right-handed alpha
Helix 220	AY4	D	422	435	Right-handed alpha
Helix 221	AY5	D	436	442	Right-handed alpha
Helix 222	AY6	D	447	466	Right-handed alpha
Helix 223	AY7	D	467	470	Right-handed 310
Helix 224	AY8	D	483	488	Right-handed alpha
Helix 225	AY9	D	489	505	Right-handed alpha
Helix 226	AZ1	D	515	530	Right-handed alpha
Helix 227	AZ2	D	544	554	Right-handed alpha
Helix 228	AZ3	D	566	570	Right-handed alpha
Helix 229	AZ4	D	589	598	Right-handed alpha
Helix 230	AZ5	D	619	650	Right-handed alpha
Helix 231	AZ6	D	653	663	Right-handed alpha
Helix 232	AZ7	D	664	670	Right-handed alpha
Helix 233	AZ8	D	687	710	Right-handed alpha
Helix 234	AZ9	M	422	436	Right-handed alpha
Helix 235	BA1	M	436	441	Right-handed alpha
Helix 236	BA2	M	450	466	Right-handed alpha
Helix 237	BA3	M	467	470	Right-handed 310
Helix 238	BA4	M	483	488	Right-handed alpha
Helix 239	BA5	M	489	505	Right-handed alpha
Helix 240	BA6	M	515	529	Right-handed alpha
Helix 241	BA7	M	541	554	Right-handed alpha
Helix 242	BA8	M	589	598	Right-handed alpha
Helix 243	BA9	M	619	641	Right-handed alpha
Helix 244	BB1	M	643	650	Right-handed alpha
Helix 245	BB2	M	653	663	Right-handed alpha
Helix 246	BB3	M	664	671	Right-handed alpha
Helix 247	BB4	M	675	681	Right-handed alpha
Helix 248	BB5	M	686	709	Right-handed alpha
Helix 249	BB6	M	712	717	Right-handed alpha
Helix 250	BB7	M	719	724	Right-handed 310

There are 16 sheets in PDB entry 5JXT. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	413	419	first strand
Strand 2	B	610	616	parallel
Strand 3	B	580	583	parallel
Strand 4	B	509	513	parallel
Strand 5	B	561	565	parallel
Strand 6	B	533	536	parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	413	419	first strand
Strand 2	E	610	616	parallel
Strand 3	E	580	583	parallel
Strand 4	E	509	513	parallel
Strand 5	E	561	565	parallel
Strand 6	E	533	536	parallel

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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	413	419	first strand
Strand 2	F	610	616	parallel
Strand 3	F	580	583	parallel
Strand 4	F	509	513	parallel
Strand 5	F	561	565	parallel
Strand 6	F	533	536	parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	413	419	first strand
Strand 2	G	610	616	parallel
Strand 3	G	580	583	parallel
Strand 4	G	509	513	parallel
Strand 5	G	561	565	parallel
Strand 6	G	533	536	parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	413	419	first strand
Strand 2	J	610	616	parallel
Strand 3	J	580	583	parallel
Strand 4	J	509	513	parallel
Strand 5	J	561	565	parallel
Strand 6	J	533	536	parallel

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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	413	419	first strand
Strand 2	N	610	616	parallel
Strand 3	N	580	583	parallel
Strand 4	N	509	513	parallel
Strand 5	N	561	565	parallel
Strand 6	N	533	536	parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	413	419	first strand
Strand 2	O	610	616	parallel
Strand 3	O	580	583	parallel
Strand 4	O	509	513	parallel
Strand 5	O	561	565	parallel
Strand 6	O	533	536	parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	413	419	first strand
Strand 2	P	610	616	parallel
Strand 3	P	580	583	parallel
Strand 4	P	509	513	parallel
Strand 5	P	561	565	parallel
Strand 6	P	533	536	parallel

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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	413	419	first strand
Strand 2	C	610	616	parallel
Strand 3	C	580	583	parallel
Strand 4	C	509	513	parallel
Strand 5	C	561	565	parallel
Strand 6	C	533	536	parallel

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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	413	419	first strand
Strand 2	H	610	616	parallel
Strand 3	H	580	583	parallel
Strand 4	H	509	513	parallel
Strand 5	H	561	565	parallel
Strand 6	H	533	536	parallel

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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	413	419	first strand
Strand 2	K	610	616	parallel
Strand 3	K	580	583	parallel
Strand 4	K	509	513	parallel
Strand 5	K	561	565	parallel
Strand 6	K	533	536	parallel

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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	413	419	first strand
Strand 2	L	610	616	parallel
Strand 3	L	580	583	parallel
Strand 4	L	509	513	parallel
Strand 5	L	561	565	parallel
Strand 6	L	533	536	parallel

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There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	413	419	first strand
Strand 2	A	610	616	parallel
Strand 3	A	580	583	parallel
Strand 4	A	509	513	parallel
Strand 5	A	561	565	parallel
Strand 6	A	533	536	parallel

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There are 6 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	413	419	first strand
Strand 2	I	610	616	parallel
Strand 3	I	580	583	parallel
Strand 4	I	509	513	parallel
Strand 5	I	561	565	parallel
Strand 6	I	533	536	parallel

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There are 6 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	413	419	first strand
Strand 2	D	610	616	parallel
Strand 3	D	580	583	parallel
Strand 4	D	509	513	parallel
Strand 5	D	561	565	parallel
Strand 6	D	533	536	parallel

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There are 6 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	413	419	first strand
Strand 2	M	610	616	parallel
Strand 3	M	580	583	parallel
Strand 4	M	509	513	parallel
Strand 5	M	561	565	parallel
Strand 6	M	533	536	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5JXT

Analysis of interatomic Contacts of Structural Units in PDB entry:
5JXT