Analysis of interatomic Contacts of Structural Units in PDB entry:
5JZS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5JZS entry

There are 2 chains in PDB entry 5JZS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 7GLY 290
B
 LEU 7GLY 290
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 31 helices in PDB entry 5JZS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
8 12Right-handed alpha
Helix 2
AA2
A
50 56Right-handed alpha
Helix 3
AA3
A
58 64Right-handed alpha
Helix 4
AA4
A
87 104Right-handed alpha
Helix 5
AA5
A
114 127Right-handed alpha
Helix 6
AA6
A
152 164Right-handed alpha
Helix 7
AA7
A
166 176Right-handed alpha
Helix 8
AA8
A
180 184Right-handed 310
Helix 9
AA9
A
185 197Right-handed alpha
Helix 10
AB1
A
198 213Right-handed alpha
Helix 11
AB2
A
216 229Right-handed 310
Helix 12
AB3
A
245 248Right-handed 310
Helix 13
AB4
A
249 256Right-handed alpha
Helix 14
AB5
A
270 275Right-handed alpha
Helix 15
AB6
A
275 287Right-handed alpha
Helix 16
AB7
B
8 12Right-handed alpha
Helix 17
AB8
B
50 55Right-handed alpha
Helix 18
AB9
B
55 64Right-handed alpha
Helix 19
AC1
B
87 104Right-handed alpha
Helix 20
AC2
B
114 127Right-handed alpha
Helix 21
AC3
B
152 164Right-handed alpha
Helix 22
AC4
B
166 176Right-handed alpha
Helix 23
AC5
B
180 184Right-handed 310
Helix 24
AC6
B
185 197Right-handed alpha
Helix 25
AC7
B
198 211Right-handed alpha
Helix 26
AC8
B
212 214Right-handed 310
Helix 27
AC9
B
216 229Right-handed 310
Helix 28
AD1
B
245 248Right-handed 310
Helix 29
AD2
B
249 256Right-handed alpha
Helix 30
AD3
B
270 275Right-handed alpha
Helix 31
AD4
B
275 287Right-handed alpha
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There are 2 sheets in PDB entry 5JZS. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
13 19first strand
Strand 2
A
23 31anti-parallel
Strand 3
A
67 71anti-parallel
Strand 4
A
38 42parallel
Strand 5
A
108 113parallel
Strand 6
A
131 137parallel
Strand 7
A
233 238parallel
Strand 8
A
259 264parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
13 19first strand
Strand 2
B
23 31anti-parallel
Strand 3
B
66 71anti-parallel
Strand 4
B
37 42parallel
Strand 5
B
108 113parallel
Strand 6
B
131 137parallel
Strand 7
B
233 238parallel
Strand 8
B
259 264parallel
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