Analysis of interatomic Contacts of Structural Units in PDB entry:
5K6J


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5K6J entry

There is 1 chain in PDB entry 5K6J (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 162ILE 484
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 5K6J. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
162 170Right-handed alpha
Helix 2
AA2
A
171 173Right-handed 310
Helix 3
AA3
A
179 187Right-handed alpha
Helix 4
AA4
A
190 203Right-handed alpha
Helix 5
AA5
A
204 209Right-handed alpha
Helix 6
AA6
A
212 226Right-handed alpha
Helix 7
AA7
A
235 251Right-handed alpha
Helix 8
AA8
A
252 256Right-handed 310
Helix 9
AA9
A
260 274Right-handed alpha
Helix 10
AB1
A
282 289Right-handed alpha
Helix 11
AB2
A
291 297Right-handed alpha
Helix 12
AB3
A
301 314Right-handed alpha
Helix 13
AB4
A
315 317Right-handed 310
Helix 14
AB5
A
327 344Right-handed alpha
Helix 15
AB6
A
345 348Right-handed 310
Helix 16
AB7
A
349 363Right-handed alpha
Helix 17
AB8
A
376 393Right-handed alpha
Helix 18
AB9
A
394 398Right-handed 310
Helix 19
AC1
A
399 424Right-handed alpha
Helix 20
AC2
A
438 450Right-handed alpha
Helix 21
AC3
A
450 462Right-handed alpha
Helix 22
AC4
A
466 483Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 5K6J.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
365 366first strand
Strand 2
A
372 373anti-parallel
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