Analysis of interatomic Contacts of Structural Units in PDB entry:
5K6L


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5K6L entry

There is 1 chain in PDB entry 5K6L (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 5ARG 798
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 5K6L. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
10 25Right-handed alpha
Helix 2
AA2
A
46 51Right-handed 310
Helix 3
AA3
A
70 78Right-handed alpha
Helix 4
AA4
A
84 98Right-handed alpha
Helix 5
AA5
A
119 129Right-handed alpha
Helix 6
AA6
A
157 171Right-handed alpha
Helix 7
AA7
A
186 193Right-handed alpha
Helix 8
AA8
A
203 205Right-handed 310
Helix 9
AA9
A
206 216Right-handed alpha
Helix 10
AB1
A
232 236Right-handed 310
Helix 11
AB2
A
238 242Right-handed 310
Helix 12
AB3
A
257 265Right-handed alpha
Helix 13
AB4
A
358 361Right-handed 310
Helix 14
AB5
A
446 454Right-handed alpha
Helix 15
AB6
A
468 474Right-handed alpha
Helix 16
AB7
A
478 484Right-handed alpha
Helix 17
AB8
A
487 495Right-handed alpha
Helix 18
AB9
A
517 523Right-handed alpha
Helix 19
AC1
A
550 557Right-handed alpha
Helix 20
AC2
A
559 577Right-handed alpha
Helix 21
AC3
A
597 601Right-handed 310
Helix 22
AC4
A
605 622Right-handed alpha
Helix 23
AC5
A
649 656Right-handed alpha
Helix 24
AC6
A
658 667Right-handed alpha
Helix 25
AC7
A
684 687Right-handed 310
Helix 26
AC8
A
688 693Right-handed alpha
Helix 27
AC9
A
725 732Right-handed alpha
Helix 28
AD1
A
751 758Right-handed alpha
Helix 29
AD2
A
762 779Right-handed alpha
Helix 30
AD3
A
780 788Right-handed alpha
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There are 11 sheets in PDB entry 5K6L. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
6 9first strand
Strand 2
A
793 796parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
26 30first strand
Strand 2
A
196 199anti-parallel
Strand 3
A
174 180parallel
Strand 4
A
132 139parallel
Strand 5
A
40 45parallel
Strand 6
A
81 83parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
229 230first strand
Strand 2
A
269 271anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
247 249first strand
Strand 2
A
645 647parallel
Strand 3
A
679 680parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
282 292first strand
Strand 2
A
297 306anti-parallel
Strand 3
A
348 356anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
333 339first strand
Strand 2
A
315 321anti-parallel
Strand 3
A
380 387anti-parallel
Strand 4
A
393 401anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
362 364first strand
Strand 2
A
374 377anti-parallel
Strand 3
A
405 409anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
421 427first strand
Strand 2
A
433 439anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
496 498first strand
Strand 2
A
737 740parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
511 514first strand
Strand 2
A
527 531anti-parallel
Strand 3
A
581 582parallel
Strand 4
A
626 627parallel
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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
672 674first strand
Strand 2
A
705 707parallel
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