Analysis of interatomic Contacts of Structural Units in PDB entry:
5K7F


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5K7F entry

There are 2 chains in PDB entry 5K7F (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 14PHE 197
B
 GLU 13PHE 197
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 5K7F. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
14 30Right-handed alpha
Helix 2
AA2
A
35 43Right-handed alpha
Helix 3
AA3
A
46 54Right-handed alpha
Helix 4
AA4
A
56 76Right-handed alpha
Helix 5
AA5
A
76 81Right-handed alpha
Helix 6
AA6
A
85 103Right-handed alpha
Helix 7
AA7
A
106 115Right-handed alpha
Helix 8
AA8
A
122 148Right-handed alpha
Helix 9
AA9
A
155 169Right-handed alpha
Helix 10
AB1
A
170 173Right-handed 310
Helix 11
AB2
A
181 194Right-handed alpha
Helix 12
AB3
B
14 30Right-handed alpha
Helix 13
AB4
B
35 43Right-handed alpha
Helix 14
AB5
B
46 54Right-handed alpha
Helix 15
AB6
B
56 76Right-handed alpha
Helix 16
AB7
B
76 81Right-handed alpha
Helix 17
AB8
B
85 104Right-handed alpha
Helix 18
AB9
B
106 115Right-handed alpha
Helix 19
AC1
B
124 148Right-handed alpha
Helix 20
AC2
B
155 169Right-handed alpha
Helix 21
AC3
B
169 174Right-handed alpha
Helix 22
AC4
B
181 194Right-handed alpha
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There are no sheets in PDB entry 5K7F
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il