Analysis of interatomic Contacts of Structural Units in PDB entry:
5KAT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5KAT entry

There is 1 chain in PDB entry 5KAT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1HIS 165
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 6 helices in PDB entry 5KAT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
22 40Right-handed alpha
Helix 2
AA2
A
41 50Right-handed alpha
Helix 3
AA3
A
79 84Right-handed alpha
Helix 4
AA4
A
106 120Right-handed alpha
Helix 5
AA5
A
121 123Right-handed 310
Helix 6
AA6
A
157 165Right-handed 310
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There is 1 sheet (AA1) in PDB entry 5KAT.

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4 8first strand
Strand 2
A
94 102anti-parallel
Strand 3
A
148 155anti-parallel
Strand 4
A
133 137anti-parallel
Strand 5
A
57 63anti-parallel
Strand 6
A
69 76anti-parallel
Strand 7
A
11 20anti-parallel
Strand 8
A
87 91anti-parallel
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