Analysis of interatomic Contacts of Structural Units in PDB entry:
5KBX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5KBX entry

There are 2 chains in PDB entry 5KBX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 3LEU 167
B
 LYS 499LYS 659
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 5KBX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
10 19Right-handed alpha
Helix 2
AA2
A
26 51Right-handed alpha
Helix 3
AA3
A
55 73Right-handed alpha
Helix 4
AA4
A
75 90Right-handed alpha
Helix 5
AA5
A
98 103Right-handed alpha
Helix 6
AA6
A
104 106Right-handed 310
Helix 7
AA7
A
134 164Right-handed alpha
Helix 8
AA8
B
512 526Right-handed alpha
Helix 9
AA9
B
535 545Right-handed alpha
Helix 10
AB1
B
561 576Right-handed alpha
Helix 11
AB2
B
614 623Right-handed alpha
Helix 12
AB3
B
635 652Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 5KBX.

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
530 533first strand
Strand 2
B
506 509parallel
Strand 3
B
550 554parallel
Strand 4
B
605 610parallel
Strand 5
B
628 631parallel
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