Analysis of interatomic Contacts of Structural Units in PDB entry:
5KC1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5KC1 entry

There are 12 chains in PDB entry 5KC1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
C
 TYR 119GLU 151
D
 MET 161ASP 211
A
 LEU 123GLU 151
B
 ASN 155ASP 211
G
 GLN 120GLY 152
H
 MET 161LEU 213
K
 SER 124GLN 147
L
 LYS 157SER 216
E
 LEU 123GLY 152
F
 LYS 157ALA 217
I
 ASP 121LYS 149
J
 LYS 157VAL 214
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 5KC1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
C
124 127Right-handed 310
Helix 2
AA2
C
128 151Right-handed alpha
Helix 3
AA3
D
163 209Right-handed alpha
Helix 4
AA4
A
128 147Right-handed alpha
Helix 5
AA5
B
156 182Right-handed alpha
Helix 6
AA6
B
182 211Right-handed alpha
Helix 7
AA7
G
124 127Right-handed 310
Helix 8
AA8
G
128 152Right-handed alpha
Helix 9
AA9
H
163 213Right-handed alpha
Helix 10
AB1
K
128 144Right-handed alpha
Helix 11
AB2
L
158 182Right-handed alpha
Helix 12
AB3
L
182 210Right-handed alpha
Helix 13
AB4
L
211 213Right-handed 310
Helix 14
AB5
E
128 151Right-handed alpha
Helix 15
AB6
F
158 182Right-handed alpha
Helix 16
AB7
F
182 207Right-handed alpha
Helix 17
AB8
F
211 216Right-handed alpha
Helix 18
AB9
I
124 127Right-handed 310
Helix 19
AC1
I
128 148Right-handed alpha
Helix 20
AC2
J
158 207Right-handed alpha
Helix 21
AC3
J
208 213Right-handed alpha
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There are no sheets in PDB entry 5KC1
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