Analysis of interatomic Contacts of Structural Units in PDB entry:
5KC6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5KC6 entry

There are 3 chains in PDB entry 5KC6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 59THR 195
B
 SER 59HIS 202
C
 SER 59GLY 194
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 3 helices in PDB entry 5KC6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
75 82Right-handed alpha
Helix 2
AA2
B
75 82Right-handed alpha
Helix 3
AA3
C
75 82Right-handed alpha
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There are 6 sheets in PDB entry 5KC6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
88 93first strand
Strand 2
A
63 67anti-parallel
Strand 3
A
184 192anti-parallel
Strand 4
A
110 120anti-parallel
Strand 5
A
151 161anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
97 98first strand
Strand 2
A
103 105anti-parallel
Strand 3
A
166 173anti-parallel
Strand 4
A
127 133anti-parallel
Strand 5
A
136 143anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
88 93first strand
Strand 2
B
63 67anti-parallel
Strand 3
B
184 192anti-parallel
Strand 4
B
110 120anti-parallel
Strand 5
B
151 161anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
97 98first strand
Strand 2
B
103 105anti-parallel
Strand 3
B
166 173anti-parallel
Strand 4
B
127 133anti-parallel
Strand 5
B
136 143anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
88 93first strand
Strand 2
C
63 67anti-parallel
Strand 3
C
184 192anti-parallel
Strand 4
C
110 120anti-parallel
Strand 5
C
151 161anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
97 98first strand
Strand 2
C
103 105anti-parallel
Strand 3
C
166 173anti-parallel
Strand 4
C
127 133anti-parallel
Strand 5
C
136 143anti-parallel
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