Analysis of interatomic Contacts of Structural Units in PDB entry:
5KCB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5KCB entry

There is 1 chain in PDB entry 5KCB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 2HIS 166
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 5 helices in PDB entry 5KCB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
23 41Right-handed alpha
Helix 2
AA2
A
42 51Right-handed alpha
Helix 3
AA3
A
107 121Right-handed alpha
Helix 4
AA4
A
122 124Right-handed 310
Helix 5
AA5
A
158 166Right-handed 310
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There is 1 sheet (AA1) in PDB entry 5KCB.

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
5 9first strand
Strand 2
A
95 103anti-parallel
Strand 3
A
149 156anti-parallel
Strand 4
A
134 138anti-parallel
Strand 5
A
58 64anti-parallel
Strand 6
A
70 77anti-parallel
Strand 7
A
12 21anti-parallel
Strand 8
A
88 92anti-parallel
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