Analysis of interatomic Contacts of Structural Units in PDB entry:
5KIV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5KIV entry

There is 1 chain in PDB entry 5KIV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY -5ARG 263
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 5KIV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
-4 21Right-handed alpha
Helix 2
AA2
A
33 48Right-handed alpha
Helix 3
AA3
A
54 70Right-handed alpha
Helix 4
AA4
A
77 79Right-handed 310
Helix 5
AA5
A
93 95Right-handed 310
Helix 6
AA6
A
120 130Right-handed alpha
Helix 7
AA7
A
130 145Right-handed alpha
Helix 8
AA8
A
180 201Right-handed alpha
Helix 9
AA9
A
219 239Right-handed alpha
Helix 10
AB1
A
250 262Right-handed alpha
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There are 2 sheets in PDB entry 5KIV. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
74 75first strand
Strand 2
A
97 98parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
87 91first strand
Strand 2
A
243 248parallel
Strand 3
A
205 208parallel
Strand 4
A
101 106parallel
Strand 5
A
165 170parallel
Strand 6
A
154 157anti-parallel
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