Analysis of interatomic Contacts of Structural Units in PDB entry:
5KLP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5KLP entry

There are 3 chains in PDB entry 5KLP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 45ARG 369
B
 GLN 46ARG 369
C
 GLU 43GLN 368
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 45 helices in PDB entry 5KLP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
47 64Right-handed alpha
Helix 2
AA2
A
66 81Right-handed alpha
Helix 3
AA3
A
87 107Right-handed alpha
Helix 4
AA4
A
117 126Right-handed alpha
Helix 5
AA5
A
179 195Right-handed alpha
Helix 6
AA6
A
198 200Right-handed 310
Helix 7
AA7
A
215 230Right-handed alpha
Helix 8
AA8
A
230 243Right-handed alpha
Helix 9
AA9
A
248 253Right-handed alpha
Helix 10
AB1
A
256 266Right-handed alpha
Helix 11
AB2
A
279 283Right-handed alpha
Helix 12
AB3
A
284 289Right-handed 310
Helix 13
AB4
A
293 302Right-handed alpha
Helix 14
AB5
A
322 330Right-handed alpha
Helix 15
AB6
A
350 368Right-handed alpha
Helix 16
AB7
B
47 64Right-handed alpha
Helix 17
AB8
B
66 81Right-handed alpha
Helix 18
AB9
B
87 107Right-handed alpha
Helix 19
AC1
B
117 126Right-handed alpha
Helix 20
AC2
B
179 195Right-handed alpha
Helix 21
AC3
B
198 200Right-handed 310
Helix 22
AC4
B
215 230Right-handed alpha
Helix 23
AC5
B
230 243Right-handed alpha
Helix 24
AC6
B
248 253Right-handed alpha
Helix 25
AC7
B
256 266Right-handed alpha
Helix 26
AC8
B
279 283Right-handed alpha
Helix 27
AC9
B
284 289Right-handed 310
Helix 28
AD1
B
293 302Right-handed alpha
Helix 29
AD2
B
322 330Right-handed alpha
Helix 30
AD3
B
350 369Right-handed alpha
Helix 31
AD4
C
47 64Right-handed alpha
Helix 32
AD5
C
66 81Right-handed alpha
Helix 33
AD6
C
87 107Right-handed alpha
Helix 34
AD7
C
117 126Right-handed alpha
Helix 35
AD8
C
179 195Right-handed alpha
Helix 36
AD9
C
198 200Right-handed 310
Helix 37
AE1
C
215 230Right-handed alpha
Helix 38
AE2
C
230 243Right-handed alpha
Helix 39
AE3
C
248 253Right-handed alpha
Helix 40
AE4
C
256 266Right-handed alpha
Helix 41
AE5
C
279 283Right-handed alpha
Helix 42
AE6
C
284 289Right-handed 310
Helix 43
AE7
C
293 302Right-handed alpha
Helix 44
AE8
C
322 330Right-handed alpha
Helix 45
AE9
C
350 367Right-handed alpha
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There are 6 sheets in PDB entry 5KLP. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
112 114first strand
Strand 2
A
132 137parallel
Strand 3
A
152 157anti-parallel
Strand 4
A
165 170anti-parallel
Strand 5
A
202 206parallel
Strand 6
A
275 278parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
331 332first strand
Strand 2
A
348 349anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
112 114first strand
Strand 2
B
132 137parallel
Strand 3
B
152 159anti-parallel
Strand 4
B
162 170anti-parallel
Strand 5
B
202 206parallel
Strand 6
B
275 278parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
331 332first strand
Strand 2
B
348 349anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
112 114first strand
Strand 2
C
132 137parallel
Strand 3
C
152 157anti-parallel
Strand 4
C
165 170anti-parallel
Strand 5
C
202 206parallel
Strand 6
C
275 278parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
331 332first strand
Strand 2
C
348 349anti-parallel
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