Analysis of interatomic Contacts of Structural Units in PDB entry:
5KT0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5KT0 entry

There is 1 chain in PDB entry 5KT0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 38LEU 311
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 5KT0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
49 62Right-handed alpha
Helix 2
AA2
A
74 78Right-handed 310
Helix 3
AA3
A
81 86Right-handed alpha
Helix 4
AA4
A
99 109Right-handed alpha
Helix 5
AA5
A
123 137Right-handed alpha
Helix 6
AA6
A
149 164Right-handed alpha
Helix 7
AA7
A
174 189Right-handed alpha
Helix 8
AA8
A
209 221Right-handed alpha
Helix 9
AA9
A
286 298Right-handed alpha
Helix 10
AB1
A
307 310Right-handed 310
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There are 2 sheets in PDB entry 5KT0. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
65 71first strand
Strand 2
A
40 45parallel
Strand 3
A
117 120parallel
Strand 4
A
140 144parallel
Strand 5
A
167 170parallel
Strand 6
A
303 305parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
243 244first strand
Strand 2
A
250 255anti-parallel
Strand 3
A
193 200parallel
Strand 4
A
261 269anti-parallel
Strand 5
A
272 280anti-parallel
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