Analysis of interatomic Contacts of Structural Units in PDB entry:
5KTK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5KTK entry

There is 1 chain in PDB entry 5KTK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 14LYS 473
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 5KTK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
44 46Right-handed 310
Helix 2
AA2
A
47 56Right-handed alpha
Helix 3
AA3
A
77 79Right-handed 310
Helix 4
AA4
A
88 91Right-handed 310
Helix 5
AA5
A
99 111Right-handed alpha
Helix 6
AA6
A
137 151Right-handed alpha
Helix 7
AA7
A
166 179Right-handed alpha
Helix 8
AA8
A
228 242Right-handed alpha
Helix 9
AA9
A
257 265Right-handed 310
Helix 10
AB1
A
269 284Right-handed alpha
Helix 11
AB2
A
297 312Right-handed alpha
Helix 12
AB3
A
331 335Right-handed 310
Helix 13
AB4
A
336 345Right-handed alpha
Helix 14
AB5
A
348 359Right-handed alpha
Helix 15
AB6
A
373 375Right-handed 310
Helix 16
AB7
A
376 381Right-handed alpha
Helix 17
AB8
A
383 401Right-handed alpha
Helix 18
AB9
A
424 431Right-handed alpha
Helix 19
AC1
A
436 450Right-handed alpha
Helix 20
AC2
A
467 471Right-handed 310
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There is 1 sheet (AA1) in PDB entry 5KTK.

There are 15 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
61 65first strand
Strand 2
A
38 43parallel
Strand 3
A
81 86parallel
Strand 4
A
116 123parallel
Strand 5
A
154 161parallel
Strand 6
A
186 190parallel
Strand 7
A
193 201anti-parallel
Strand 8
A
16 26anti-parallel
Strand 9
A
455 461anti-parallel
Strand 10
A
406 411parallel
Strand 11
A
366 371parallel
Strand 12
A
315 320parallel
Strand 13
A
220 224parallel
Strand 14
A
246 251parallel
Strand 15
A
287 292parallel
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