Analysis of interatomic Contacts of Structural Units in PDB entry:
5KTL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5KTL entry

There are 4 chains in PDB entry 5KTL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 0VAL 163
A
 GLU 165ILE 294
B
 SER 0VAL 163
B
 GLU 165ILE 294
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 5KTL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
22 35Right-handed alpha
Helix 2
AA2
A
49 53Right-handed 310
Helix 3
AA3
A
54 70Right-handed alpha
Helix 4
AA4
A
83 98Right-handed alpha
Helix 5
AA5
A
113 128Right-handed alpha
Helix 6
AA6
A
138 143Right-handed alpha
Helix 7
AA7
A
147 156Right-handed alpha
Helix 8
AA8
A
169 179Right-handed alpha
Helix 9
AA9
A
190 192Right-handed 310
Helix 10
AB1
A
193 200Right-handed alpha
Helix 11
AB2
A
209 226Right-handed alpha
Helix 12
AB3
A
228 246Right-handed alpha
Helix 13
AB4
A
252 262Right-handed alpha
Helix 14
AB5
A
277 291Right-handed alpha
Helix 15
AB6
B
22 35Right-handed alpha
Helix 16
AB7
B
49 53Right-handed 310
Helix 17
AB8
B
54 70Right-handed alpha
Helix 18
AB9
B
83 97Right-handed alpha
Helix 19
AC1
B
113 128Right-handed alpha
Helix 20
AC2
B
138 143Right-handed alpha
Helix 21
AC3
B
147 155Right-handed alpha
Helix 22
AC4
B
169 179Right-handed alpha
Helix 23
AC5
B
190 192Right-handed 310
Helix 24
AC6
B
193 199Right-handed alpha
Helix 25
AC7
B
209 226Right-handed alpha
Helix 26
AC8
B
228 246Right-handed alpha
Helix 27
AC9
B
252 262Right-handed alpha
Helix 28
AD1
B
277 291Right-handed alpha
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There are 2 sheets in PDB entry 5KTL. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
7 10first strand
Strand 2
A
40 43parallel
Strand 3
A
74 78parallel
Strand 4
A
101 105parallel
Strand 5
A
133 137parallel
Strand 6
A
160 165parallel
Strand 7
A
185 188parallel
Strand 8
A
204 207parallel
Strand 9
A
7 10parallel
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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
7 10first strand
Strand 2
B
40 43parallel
Strand 3
B
74 78parallel
Strand 4
B
101 105parallel
Strand 5
B
133 137parallel
Strand 6
B
160 165parallel
Strand 7
B
185 188parallel
Strand 8
B
204 207parallel
Strand 9
B
7 10parallel
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