Analysis of interatomic Contacts of Structural Units in PDB entry:
5KXF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5KXF entry

There is 1 chain in PDB entry 5KXF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 439ALA 565
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 4 helices in PDB entry 5KXF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
480 490Right-handed alpha
Helix 2
AA2
A
502 504Right-handed 310
Helix 3
AA3
A
505 518Right-handed alpha
Helix 4
AA4
A
540 545Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 5KXF.

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
471 474first strand
Strand 2
A
442 447parallel
Strand 3
A
450 459anti-parallel
Strand 4
A
492 500anti-parallel
Strand 5
A
554 560anti-parallel
Strand 6
A
532 536anti-parallel
Strand 7
A
521 526anti-parallel
Strand 8
A
476 479anti-parallel
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