Analysis of interatomic Contacts of Structural Units in PDB entry:
5KYG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5KYG entry

There is 1 chain in PDB entry 5KYG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TRP 62PRO 268
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 5KYG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
65 78Right-handed alpha
Helix 2
AA2
A
94 103Right-handed alpha
Helix 3
AA3
A
119 124Right-handed alpha
Helix 4
AA4
A
135 139Right-handed 310
Helix 5
AA5
A
140 145Right-handed alpha
Helix 6
AA6
A
159 170Right-handed alpha
Helix 7
AA7
A
182 187Right-handed alpha
Helix 8
AA8
A
193 197Right-handed 310
Helix 9
AA9
A
200 218Right-handed alpha
Helix 10
AB1
A
232 236Right-handed 310
Helix 11
AB2
A
252 267Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 5KYG.

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
128 132first strand
Strand 2
A
107 112parallel
Strand 3
A
85 89parallel
Strand 4
A
148 153parallel
Strand 5
A
171 181parallel
Strand 6
A
239 244anti-parallel
Strand 7
A
221 227anti-parallel
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