Analysis of interatomic Contacts of Structural Units in PDB entry:
5KZ8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5KZ8 entry

There are 2 chains in PDB entry 5KZ8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 48TYR 363
B
 PRO 48TYR 363
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 5KZ8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
90 105Right-handed alpha
Helix 2
AA2
A
137 145Right-handed alpha
Helix 3
AA3
A
148 169Right-handed alpha
Helix 4
AA4
A
212 216Right-handed 310
Helix 5
AA5
A
217 221Right-handed 310
Helix 6
AA6
A
229 246Right-handed alpha
Helix 7
AA7
A
254 265Right-handed alpha
Helix 8
AA8
A
274 285Right-handed alpha
Helix 9
AA9
A
294 299Right-handed alpha
Helix 10
AB1
A
325 335Right-handed alpha
Helix 11
AB2
A
338 348Right-handed alpha
Helix 12
AB3
A
352 362Right-handed alpha
Helix 13
AB4
B
90 105Right-handed alpha
Helix 14
AB5
B
137 145Right-handed alpha
Helix 15
AB6
B
148 169Right-handed alpha
Helix 16
AB7
B
212 216Right-handed 310
Helix 17
AB8
B
217 221Right-handed 310
Helix 18
AB9
B
229 246Right-handed alpha
Helix 19
AC1
B
254 265Right-handed alpha
Helix 20
AC2
B
274 285Right-handed alpha
Helix 21
AC3
B
294 299Right-handed alpha
Helix 22
AC4
B
300 301Right-handed 310
Helix 23
AC5
B
302 306Right-handed 310
Helix 24
AC6
B
325 335Right-handed alpha
Helix 25
AC7
B
338 348Right-handed alpha
Helix 26
AC8
B
352 362Right-handed alpha
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There are 4 sheets in PDB entry 5KZ8. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
53 55first strand
Strand 2
A
65 72anti-parallel
Strand 3
A
78 85anti-parallel
Strand 4
A
124 129anti-parallel
Strand 5
A
115 120anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
135 136first strand
Strand 2
A
181 183anti-parallel
Strand 3
A
189 191anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
53 55first strand
Strand 2
B
65 72anti-parallel
Strand 3
B
78 85anti-parallel
Strand 4
B
124 129anti-parallel
Strand 5
B
115 120anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
135 136first strand
Strand 2
B
181 183anti-parallel
Strand 3
B
189 191anti-parallel
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