Analysis of interatomic Contacts of Structural Units in PDB entry:
5L0F


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5L0F entry

There are 2 chains in PDB entry 5L0F (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 959GLN 1134
B
 ASN 959GLN 1134
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 5L0F. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
963 978Right-handed alpha
Helix 2
AA2
A
985 1005Right-handed alpha
Helix 3
AA3
A
1006 1007Right-handed 310
Helix 4
AA4
A
1008 1010Right-handed 310
Helix 5
AA5
A
1011 1040Right-handed alpha
Helix 6
AA6
A
1042 1074Right-handed alpha
Helix 7
AA7
A
1080 1114Right-handed alpha
Helix 8
AA8
B
963 978Right-handed alpha
Helix 9
AA9
B
985 1005Right-handed alpha
Helix 10
AB1
B
1006 1007Right-handed 310
Helix 11
AB2
B
1008 1010Right-handed 310
Helix 12
AB3
B
1011 1040Right-handed alpha
Helix 13
AB4
B
1042 1074Right-handed alpha
Helix 14
AB5
B
1080 1113Right-handed alpha
Helix 15
AB6
B
1114 1116Right-handed 310
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There are no sheets in PDB entry 5L0F
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il