Analysis of interatomic Contacts of Structural Units in PDB entry:
5L0J


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5L0J entry

There are 2 chains in PDB entry 5L0J (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 891PRO 1063
B
 VAL 893TRP 1064
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 5L0J. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
895 910Right-handed alpha
Helix 2
AA2
A
917 937Right-handed alpha
Helix 3
AA3
A
943 971Right-handed alpha
Helix 4
AA4
A
974 1005Right-handed alpha
Helix 5
AA5
A
1014 1045Right-handed alpha
Helix 6
AA6
B
895 910Right-handed alpha
Helix 7
AA7
B
917 935Right-handed alpha
Helix 8
AA8
B
943 971Right-handed alpha
Helix 9
AA9
B
974 1004Right-handed alpha
Helix 10
AB1
B
1014 1044Right-handed alpha
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There are no sheets in PDB entry 5L0J
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il