Analysis of interatomic Contacts of Structural Units in PDB entry:
5L0W

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5L0W entry

There are 2 chains in PDB entry 5L0W (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
B	ASP 5	ASP 213
A	ASN 23	LYS 184

There are 15 helices in PDB entry 5L0W. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	B	30	55	Right-handed alpha
Helix 2	AA2	B	70	89	Right-handed alpha
Helix 3	AA3	B	91	108	Right-handed alpha
Helix 4	AA4	B	114	136	Right-handed alpha
Helix 5	AA5	B	138	153	Right-handed alpha
Helix 6	AA6	B	157	171	Right-handed alpha
Helix 7	AA7	B	173	185	Right-handed alpha
Helix 8	AA8	B	191	211	Right-handed alpha
Helix 9	AA9	A	30	41	Right-handed alpha
Helix 10	AB1	A	55	84	Right-handed alpha
Helix 11	AB2	A	85	89	Right-handed 310
Helix 12	AB3	A	90	123	Right-handed alpha
Helix 13	AB4	A	125	128	Right-handed 310
Helix 14	AB5	A	129	165	Right-handed alpha
Helix 15	AB6	A	166	168	Right-handed 310

There is 1 sheet (AA1) in PDB entry 5L0W.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	12	14	first strand
Strand 2	B	21	23	anti-parallel

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5L0W

Analysis of interatomic Contacts of Structural Units in PDB entry:
5L0W