Analysis of interatomic Contacts of Structural Units in PDB entry:
5L0Y


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5L0Y entry

There are 13 chains in PDB entry 5L0Y (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 68ASP 226
B
 VAL 68ASP 216
C
 VAL 68ASN 217
D
 ALA 74ASP 226
E
 PRO 70ASP 226
F
 SER 73ASP 213
G
 VAL 68HIS 215
H
 LYS 71LYS 209
I
 THR 221ASP 226
J
 PRO 220ASP 226
K
 PRO 220ASP 226
L
 THR 221ASP 226
M
 VAL 222ASP 226
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 61 helices in PDB entry 5L0Y. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
71 89Right-handed alpha
Helix 2
AA2
A
91 108Right-handed alpha
Helix 3
AA3
A
116 135Right-handed alpha
Helix 4
AA4
A
138 153Right-handed alpha
Helix 5
AA5
A
157 171Right-handed alpha
Helix 6
AA6
A
173 189Right-handed alpha
Helix 7
AA7
A
191 215Right-handed alpha
Helix 8
AA8
A
220 224Right-handed 310
Helix 9
AA9
B
71 89Right-handed alpha
Helix 10
AB1
B
91 108Right-handed alpha
Helix 11
AB2
B
115 136Right-handed alpha
Helix 12
AB3
B
138 153Right-handed alpha
Helix 13
AB4
B
157 171Right-handed alpha
Helix 14
AB5
B
173 188Right-handed alpha
Helix 15
AB6
B
191 214Right-handed alpha
Helix 16
AB7
C
70 89Right-handed alpha
Helix 17
AB8
C
91 108Right-handed alpha
Helix 18
AB9
C
117 136Right-handed alpha
Helix 19
AC1
C
138 153Right-handed alpha
Helix 20
AC2
C
157 171Right-handed alpha
Helix 21
AC3
C
173 187Right-handed alpha
Helix 22
AC4
C
191 217Right-handed alpha
Helix 23
AC5
D
75 89Right-handed alpha
Helix 24
AC6
D
91 108Right-handed alpha
Helix 25
AC7
D
115 136Right-handed alpha
Helix 26
AC8
D
138 153Right-handed alpha
Helix 27
AC9
D
157 171Right-handed alpha
Helix 28
AD1
D
173 188Right-handed alpha
Helix 29
AD2
D
191 217Right-handed alpha
Helix 30
AD3
D
220 224Right-handed 310
Helix 31
AD4
E
71 89Right-handed alpha
Helix 32
AD5
E
92 108Right-handed alpha
Helix 33
AD6
E
116 137Right-handed alpha
Helix 34
AD7
E
138 153Right-handed alpha
Helix 35
AD8
E
157 171Right-handed alpha
Helix 36
AD9
E
173 188Right-handed alpha
Helix 37
AE1
E
192 213Right-handed alpha
Helix 38
AE2
E
220 224Right-handed 310
Helix 39
AE3
F
74 89Right-handed alpha
Helix 40
AE4
F
91 108Right-handed alpha
Helix 41
AE5
F
115 136Right-handed alpha
Helix 42
AE6
F
138 153Right-handed alpha
Helix 43
AE7
F
157 171Right-handed alpha
Helix 44
AE8
F
173 187Right-handed alpha
Helix 45
AE9
F
191 213Right-handed alpha
Helix 46
AF1
G
71 89Right-handed alpha
Helix 47
AF2
G
91 108Right-handed alpha
Helix 48
AF3
G
115 135Right-handed alpha
Helix 49
AF4
G
138 153Right-handed alpha
Helix 50
AF5
G
157 171Right-handed alpha
Helix 51
AF6
G
173 187Right-handed alpha
Helix 52
AF7
G
193 215Right-handed alpha
Helix 53
AF8
H
72 89Right-handed alpha
Helix 54
AF8
H
91 108Right-handed alpha
Helix 55
AG1
H
121 136Right-handed alpha
Helix 56
AG2
H
138 153Right-handed alpha
Helix 57
AG3
H
157 171Right-handed alpha
Helix 58
AG4
H
173 187Right-handed alpha
Helix 59
AG5
H
192 209Right-handed alpha
Helix 60
AG6
J
220 224Right-handed 310
Helix 61
AG7
K
220 224Right-handed 310
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There are no sheets in PDB entry 5L0Y
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