Analysis of interatomic Contacts of Structural Units in PDB entry:
5L0Z


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5L0Z entry

There are 2 chains in PDB entry 5L0Z (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 16LEU 284
B
 GLY 16SER 283
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 5L0Z. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
27 34Right-handed alpha
Helix 2
AA2
A
37 43Right-handed alpha
Helix 3
AA3
A
51 61Right-handed alpha
Helix 4
AA4
A
79 90Right-handed alpha
Helix 5
AA5
A
98 107Right-handed alpha
Helix 6
AA6
A
124 128Right-handed 310
Helix 7
AA7
A
144 158Right-handed alpha
Helix 8
AA8
A
174 181Right-handed alpha
Helix 9
AA9
A
182 187Right-handed 310
Helix 10
AB1
A
194 205Right-handed alpha
Helix 11
AB2
A
221 223Right-handed 310
Helix 12
AB3
A
242 247Right-handed alpha
Helix 13
AB4
A
265 278Right-handed alpha
Helix 14
AB5
A
279 282Right-handed 310
Helix 15
AB6
B
26 31Right-handed alpha
Helix 16
AB7
B
32 36Right-handed 310
Helix 17
AB8
B
37 44Right-handed alpha
Helix 18
AB9
B
51 61Right-handed alpha
Helix 19
AC1
B
79 90Right-handed alpha
Helix 20
AC2
B
98 107Right-handed alpha
Helix 21
AC3
B
124 128Right-handed 310
Helix 22
AC4
B
144 159Right-handed alpha
Helix 23
AC5
B
174 182Right-handed alpha
Helix 24
AC6
B
183 187Right-handed 310
Helix 25
AC7
B
194 206Right-handed alpha
Helix 26
AC8
B
221 223Right-handed 310
Helix 27
AC9
B
242 247Right-handed alpha
Helix 28
AD1
B
265 278Right-handed alpha
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There are 4 sheets in PDB entry 5L0Z. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
19 20first strand
Strand 2
A
93 96parallel
Strand 3
A
65 69parallel
Strand 4
A
115 119anti-parallel
Strand 5
A
46 50anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
190 193first strand
Strand 2
A
162 166parallel
Strand 3
A
135 140parallel
Strand 4
A
230 234parallel
Strand 5
A
208 212parallel
Strand 6
A
251 254parallel
Strand 7
A
218 219parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
18 20first strand
Strand 2
B
93 96parallel
Strand 3
B
65 69parallel
Strand 4
B
115 119anti-parallel
Strand 5
B
46 50anti-parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
190 193first strand
Strand 2
B
162 166parallel
Strand 3
B
135 140parallel
Strand 4
B
230 234parallel
Strand 5
B
208 212parallel
Strand 6
B
251 254parallel
Strand 7
B
218 219parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il