Analysis of interatomic Contacts of Structural Units in PDB entry:
5L2A


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5L2A entry

There are 3 chains in PDB entry 5L2A (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL -2SER 419
B
 PRO -1VAL 423
C
 MET 1GLY 417
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 77 helices in PDB entry 5L2A. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
-2 20Right-handed alpha
Helix 2
AA2
A
23 27Right-handed 310
Helix 3
AA3
A
28 47Right-handed alpha
Helix 4
AA4
A
49 78Right-handed alpha
Helix 5
AA5
A
79 84Right-handed 310
Helix 6
AA6
A
85 90Right-handed alpha
Helix 7
AA7
A
91 95Right-handed 310
Helix 8
AA8
A
96 101Right-handed alpha
Helix 9
AA9
A
101 119Right-handed alpha
Helix 10
AB1
A
119 136Right-handed alpha
Helix 11
AB2
A
139 152Right-handed alpha
Helix 12
AB3
A
161 166Right-handed alpha
Helix 13
AB4
A
169 183Right-handed alpha
Helix 14
AB5
A
185 194Right-handed alpha
Helix 15
AB6
A
198 221Right-handed alpha
Helix 16
AB7
A
244 288Right-handed alpha
Helix 17
AB8
A
294 303Right-handed alpha
Helix 18
AB9
A
303 311Right-handed alpha
Helix 19
AC1
A
313 330Right-handed alpha
Helix 20
AC2
A
331 344Right-handed alpha
Helix 21
AC3
A
352 364Right-handed alpha
Helix 22
AC4
A
370 383Right-handed alpha
Helix 23
AC5
A
386 393Right-handed alpha
Helix 24
AC6
A
393 419Right-handed alpha
Helix 25
AC7
B
0 20Right-handed alpha
Helix 26
AC8
B
28 48Right-handed alpha
Helix 27
AC9
B
49 78Right-handed alpha
Helix 28
AD1
B
79 83Right-handed 310
Helix 29
AD2
B
84 90Right-handed alpha
Helix 30
AD3
B
91 95Right-handed 310
Helix 31
AD4
B
96 101Right-handed alpha
Helix 32
AD5
B
101 119Right-handed alpha
Helix 33
AD6
B
119 136Right-handed alpha
Helix 34
AD7
B
139 149Right-handed alpha
Helix 35
AD8
B
157 161Right-handed 310
Helix 36
AD9
B
164 168Right-handed 310
Helix 37
AE1
B
169 183Right-handed alpha
Helix 38
AE2
B
188 196Right-handed alpha
Helix 39
AE3
B
198 209Right-handed alpha
Helix 40
AE4
B
210 216Right-handed alpha
Helix 41
AE5
B
216 221Right-handed alpha
Helix 42
AE6
B
244 285Right-handed alpha
Helix 43
AE7
B
294 303Right-handed alpha
Helix 44
AE8
B
303 311Right-handed alpha
Helix 45
AE9
B
316 330Right-handed alpha
Helix 46
AF1
B
331 338Right-handed alpha
Helix 47
AF2
B
352 364Right-handed alpha
Helix 48
AF3
B
371 380Right-handed alpha
Helix 49
AF4
B
383 385Right-handed 310
Helix 50
AF5
B
386 393Right-handed alpha
Helix 51
AF6
B
393 416Right-handed alpha
Helix 52
AF7
C
2 20Right-handed alpha
Helix 53
AF8
C
23 27Right-handed 310
Helix 54
AF9
C
28 48Right-handed alpha
Helix 55
AG1
C
51 69Right-handed alpha
Helix 56
AG2
C
70 78Right-handed alpha
Helix 57
AG3
C
79 84Right-handed 310
Helix 58
AG4
C
85 90Right-handed alpha
Helix 59
AG5
C
96 101Right-handed alpha
Helix 60
AG6
C
101 118Right-handed alpha
Helix 61
AG7
C
119 125Right-handed alpha
Helix 62
AG8
C
127 132Right-handed alpha
Helix 63
AG9
C
141 150Right-handed alpha
Helix 64
AH1
C
161 166Right-handed alpha
Helix 65
AH2
C
169 182Right-handed alpha
Helix 66
AH3
C
185 196Right-handed alpha
Helix 67
AH4
C
198 216Right-handed alpha
Helix 68
AH5
C
244 288Right-handed alpha
Helix 69
AH6
C
294 311Right-handed alpha
Helix 70
AH7
C
316 330Right-handed alpha
Helix 71
AH8
C
331 344Right-handed alpha
Helix 72
AH9
C
345 348Right-handed 310
Helix 73
AI1
C
354 363Right-handed alpha
Helix 74
AI2
C
370 383Right-handed alpha
Helix 75
AI3
C
384 386Right-handed 310
Helix 76
AI4
C
387 392Right-handed alpha
Helix 77
AI5
C
394 415Right-handed alpha
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There are no sheets in PDB entry 5L2A
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