Analysis of interatomic Contacts of Structural Units in PDB entry:
5L2B


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5L2B entry

There are 3 chains in PDB entry 5L2B (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO -1SER 419
B
 ARG 0VAL 423
C
 VAL 2GLY 417
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 80 helices in PDB entry 5L2B. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 20Right-handed alpha
Helix 2
AA2
A
23 27Right-handed 310
Helix 3
AA3
A
28 46Right-handed alpha
Helix 4
AA4
A
49 79Right-handed alpha
Helix 5
AA5
A
80 83Right-handed 310
Helix 6
AA6
A
84 90Right-handed alpha
Helix 7
AA7
A
91 95Right-handed 310
Helix 8
AA8
A
96 101Right-handed alpha
Helix 9
AA9
A
101 119Right-handed alpha
Helix 10
AB1
A
119 136Right-handed alpha
Helix 11
AB2
A
139 149Right-handed alpha
Helix 12
AB3
A
164 168Right-handed 310
Helix 13
AB4
A
169 183Right-handed alpha
Helix 14
AB5
A
185 196Right-handed alpha
Helix 15
AB6
A
198 221Right-handed alpha
Helix 16
AB7
A
244 285Right-handed alpha
Helix 17
AB8
A
286 288Right-handed 310
Helix 18
AB9
A
294 303Right-handed alpha
Helix 19
AC1
A
303 310Right-handed alpha
Helix 20
AC2
A
313 330Right-handed alpha
Helix 21
AC3
A
331 338Right-handed alpha
Helix 22
AC4
A
339 343Right-handed 310
Helix 23
AC5
A
352 363Right-handed alpha
Helix 24
AC6
A
371 380Right-handed alpha
Helix 25
AC7
A
383 385Right-handed 310
Helix 26
AC8
A
386 393Right-handed alpha
Helix 27
AC9
A
393 416Right-handed alpha
Helix 28
AD1
B
2 20Right-handed alpha
Helix 29
AD2
B
23 27Right-handed 310
Helix 30
AD3
B
28 46Right-handed alpha
Helix 31
AD4
B
49 78Right-handed alpha
Helix 32
AD5
B
79 84Right-handed 310
Helix 33
AD6
B
85 90Right-handed alpha
Helix 34
AD7
B
91 95Right-handed 310
Helix 35
AD8
B
96 101Right-handed alpha
Helix 36
AD9
B
101 119Right-handed alpha
Helix 37
AE1
B
119 136Right-handed alpha
Helix 38
AE2
B
139 149Right-handed alpha
Helix 39
AE3
B
158 162Right-handed 310
Helix 40
AE4
B
164 168Right-handed 310
Helix 41
AE5
B
169 183Right-handed alpha
Helix 42
AE6
B
185 196Right-handed alpha
Helix 43
AE7
B
198 208Right-handed alpha
Helix 44
AE8
B
208 221Right-handed alpha
Helix 45
AE9
B
244 285Right-handed alpha
Helix 46
AF1
B
286 288Right-handed 310
Helix 47
AF2
B
294 303Right-handed alpha
Helix 48
AF3
B
303 311Right-handed alpha
Helix 49
AF4
B
316 330Right-handed alpha
Helix 50
AF5
B
331 338Right-handed alpha
Helix 51
AF6
B
339 344Right-handed 310
Helix 52
AF7
B
352 363Right-handed alpha
Helix 53
AF8
B
368 370Right-handed 310
Helix 54
AF9
B
371 383Right-handed alpha
Helix 55
AG1
B
386 393Right-handed alpha
Helix 56
AG2
B
393 416Right-handed alpha
Helix 57
AG3
C
3 20Right-handed alpha
Helix 58
AG4
C
28 48Right-handed alpha
Helix 59
AG5
C
51 68Right-handed alpha
Helix 60
AG6
C
69 78Right-handed alpha
Helix 61
AG7
C
79 83Right-handed 310
Helix 62
AG8
C
84 90Right-handed alpha
Helix 63
AG9
C
91 95Right-handed 310
Helix 64
AH1
C
96 101Right-handed alpha
Helix 65
AH2
C
101 116Right-handed alpha
Helix 66
AH3
C
119 136Right-handed alpha
Helix 67
AH4
C
143 150Right-handed alpha
Helix 68
AH5
C
161 166Right-handed alpha
Helix 69
AH6
C
169 183Right-handed alpha
Helix 70
AH7
C
186 194Right-handed alpha
Helix 71
AH8
C
198 207Right-handed alpha
Helix 72
AH9
C
208 221Right-handed alpha
Helix 73
AI1
C
244 288Right-handed alpha
Helix 74
AI2
C
294 311Right-handed alpha
Helix 75
AI3
C
316 330Right-handed alpha
Helix 76
AI4
C
332 340Right-handed alpha
Helix 77
AI5
C
352 364Right-handed alpha
Helix 78
AI6
C
371 383Right-handed alpha
Helix 79
AI7
C
386 392Right-handed alpha
Helix 80
AI8
C
393 415Right-handed alpha
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There are no sheets in PDB entry 5L2B
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