Analysis of interatomic Contacts of Structural Units in PDB entry:
5L2L


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5L2L entry

There are 8 chains in PDB entry 5L2L (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 408LEU 479
B
 GLY 407PRO 480
C
 A 3 G 12
D
 A 2 G 12
E
 GLU 409PRO 480
F
 GLY 407GLU 481
G
 A 3 G 12
H
 A 3 G 12
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 5L2L. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
417 421Right-handed 310
Helix 2
AA2
A
439 443Right-handed 310
Helix 3
AA3
A
460 464Right-handed 310
Helix 4
AA4
B
417 421Right-handed 310
Helix 5
AA5
B
439 443Right-handed 310
Helix 6
AA6
B
460 464Right-handed 310
Helix 7
AA7
E
417 421Right-handed 310
Helix 8
AA8
E
439 443Right-handed 310
Helix 9
AA9
E
460 464Right-handed 310
Helix 10
AB1
F
417 421Right-handed 310
Helix 11
AB2
F
439 443Right-handed 310
Helix 12
AB3
F
460 464Right-handed 310
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There are no sheets in PDB entry 5L2L
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il