Analysis of interatomic Contacts of Structural Units in PDB entry:
5L2S


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5L2S entry

There is 1 chain in PDB entry 5L2S (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 11GLN 301
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 5L2S. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
34 36Right-handed 310
Helix 2
AA2
A
56 70Right-handed alpha
Helix 3
AA3
A
105 112Right-handed alpha
Helix 4
AA4
A
118 139Right-handed alpha
Helix 5
AA5
A
147 149Right-handed 310
Helix 6
AA6
A
187 192Right-handed alpha
Helix 7
AA7
A
198 215Right-handed alpha
Helix 8
AA8
A
223 236Right-handed alpha
Helix 9
AA9
A
239 243Right-handed 310
Helix 10
AB1
A
250 254Right-handed 310
Helix 11
AB2
A
261 265Right-handed 310
Helix 12
AB3
A
270 281Right-handed alpha
Helix 13
AB4
A
290 295Right-handed alpha
Helix 14
AB5
A
296 301Right-handed 310
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There are 2 sheets in PDB entry 5L2S. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
13 22first strand
Strand 2
A
25 32anti-parallel
Strand 3
A
39 45anti-parallel
Strand 4
A
94 99anti-parallel
Strand 5
A
79 83anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
103 104first strand
Strand 2
A
151 153anti-parallel
Strand 3
A
159 161anti-parallel
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