Analysis of interatomic Contacts of Structural Units in PDB entry:
5L3X


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5L3X entry

There are 2 chains in PDB entry 5L3X (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 6SER 182
B
 GLY 186ASN 590
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 5L3X. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
8 18Right-handed alpha
Helix 2
AA2
A
28 33Right-handed alpha
Helix 3
AA3
A
34 45Right-handed alpha
Helix 4
AA4
A
46 48Right-handed 310
Helix 5
AA5
A
49 60Right-handed alpha
Helix 6
AA6
A
61 63Right-handed 310
Helix 7
AA7
A
64 71Right-handed alpha
Helix 8
AA8
A
71 83Right-handed alpha
Helix 9
AA9
A
87 97Right-handed alpha
Helix 10
AB1
A
99 104Right-handed alpha
Helix 11
AB2
A
114 131Right-handed alpha
Helix 12
AB3
A
138 144Right-handed 310
Helix 13
AB4
A
145 154Right-handed alpha
Helix 14
AB5
A
170 181Right-handed alpha
Helix 15
AB6
B
190 197Right-handed alpha
Helix 16
AB7
B
197 216Right-handed alpha
Helix 17
AB8
B
219 232Right-handed alpha
Helix 18
AB9
B
234 249Right-handed alpha
Helix 19
AC1
B
255 272Right-handed alpha
Helix 20
AC2
B
276 284Right-handed alpha
Helix 21
AC3
B
285 288Right-handed 310
Helix 22
AC4
B
289 303Right-handed alpha
Helix 23
AC5
B
306 317Right-handed alpha
Helix 24
AC6
B
324 328Right-handed 310
Helix 25
AC7
B
330 342Right-handed alpha
Helix 26
AC8
B
352 366Right-handed alpha
Helix 27
AC9
B
382 400Right-handed alpha
Helix 28
AD1
B
410 419Right-handed alpha
Helix 29
AD2
B
420 437Right-handed alpha
Helix 30
AD3
B
450 462Right-handed alpha
Helix 31
AD4
B
465 478Right-handed alpha
Helix 32
AD5
B
485 505Right-handed alpha
Helix 33
AD6
B
508 522Right-handed alpha
Helix 34
AD7
B
526 539Right-handed alpha
Helix 35
AD8
B
546 558Right-handed alpha
Helix 36
AD9
B
574 586Right-handed alpha
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There are 2 sheets in PDB entry 5L3X. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
164 165first strand
Strand 2
B
541 542anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
367 370first strand
Strand 2
B
375 379anti-parallel
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