Analysis of interatomic Contacts of Structural Units in PDB entry:
5L44


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5L44 entry

There are 2 chains in PDB entry 5L44 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 10LEU 671
B
 GLU 10LEU 671
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 73 helices in PDB entry 5L44. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
11 15Right-handed 310
Helix 2
AA2
A
19 23Right-handed 310
Helix 3
AA3
A
30 32Right-handed 310
Helix 4
AA4
A
33 54Right-handed alpha
Helix 5
AA5
A
64 71Right-handed alpha
Helix 6
AA6
A
72 89Right-handed alpha
Helix 7
AA7
A
91 114Right-handed alpha
Helix 8
AA8
A
115 124Right-handed alpha
Helix 9
AA9
A
131 148Right-handed alpha
Helix 10
AB1
A
153 185Right-handed alpha
Helix 11
AB2
A
191 196Right-handed 310
Helix 12
AB3
A
199 213Right-handed alpha
Helix 13
AB4
A
229 234Right-handed 310
Helix 14
AB5
A
237 250Right-handed alpha
Helix 15
AB6
A
256 274Right-handed alpha
Helix 16
AB7
A
278 285Right-handed alpha
Helix 17
AB8
A
291 322Right-handed alpha
Helix 18
AB9
A
326 328Right-handed 310
Helix 19
AC1
A
329 343Right-handed alpha
Helix 20
AC2
A
345 350Right-handed alpha
Helix 21
AC3
A
351 353Right-handed 310
Helix 22
AC4
A
354 362Right-handed alpha
Helix 23
AC5
A
362 372Right-handed alpha
Helix 24
AC6
A
454 473Right-handed alpha
Helix 25
AC7
A
478 482Right-handed 310
Helix 26
AC8
A
487 499Right-handed alpha
Helix 27
AC9
A
499 504Right-handed alpha
Helix 28
AD1
A
504 512Right-handed alpha
Helix 29
AD2
A
522 532Right-handed alpha
Helix 30
AD3
A
536 555Right-handed alpha
Helix 31
AD4
A
563 575Right-handed alpha
Helix 32
AD5
A
587 590Right-handed 310
Helix 33
AD6
A
591 596Right-handed alpha
Helix 34
AD7
A
604 623Right-handed alpha
Helix 35
AD8
A
627 638Right-handed alpha
Helix 36
AD9
A
646 656Right-handed alpha
Helix 37
AE1
A
661 669Right-handed alpha
Helix 38
AE2
B
19 23Right-handed 310
Helix 39
AE3
B
30 32Right-handed 310
Helix 40
AE4
B
33 54Right-handed alpha
Helix 41
AE5
B
60 71Right-handed alpha
Helix 42
AE6
B
72 89Right-handed alpha
Helix 43
AE7
B
91 114Right-handed alpha
Helix 44
AE8
B
115 124Right-handed alpha
Helix 45
AE9
B
131 148Right-handed alpha
Helix 46
AF1
B
153 185Right-handed alpha
Helix 47
AF2
B
191 196Right-handed 310
Helix 48
AF3
B
199 213Right-handed alpha
Helix 49
AF4
B
229 234Right-handed 310
Helix 50
AF5
B
237 250Right-handed alpha
Helix 51
AF6
B
256 274Right-handed alpha
Helix 52
AF7
B
278 285Right-handed alpha
Helix 53
AF8
B
291 322Right-handed alpha
Helix 54
AF9
B
326 328Right-handed 310
Helix 55
AG1
B
329 343Right-handed alpha
Helix 56
AG2
B
345 350Right-handed alpha
Helix 57
AG3
B
351 353Right-handed 310
Helix 58
AG4
B
354 362Right-handed alpha
Helix 59
AG5
B
362 372Right-handed alpha
Helix 60
AG6
B
454 473Right-handed alpha
Helix 61
AG7
B
478 482Right-handed 310
Helix 62
AG8
B
487 499Right-handed alpha
Helix 63
AG9
B
499 504Right-handed alpha
Helix 64
AH1
B
504 512Right-handed alpha
Helix 65
AH2
B
522 534Right-handed alpha
Helix 66
AH3
B
536 555Right-handed alpha
Helix 67
AH4
B
563 575Right-handed alpha
Helix 68
AH5
B
587 590Right-handed 310
Helix 69
AH6
B
591 596Right-handed alpha
Helix 70
AH7
B
604 623Right-handed alpha
Helix 71
AH8
B
627 638Right-handed alpha
Helix 72
AH9
B
646 656Right-handed alpha
Helix 73
AI1
B
661 669Right-handed alpha
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There are 4 sheets in PDB entry 5L44. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
187 189first strand
Strand 2
A
219 221anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
374 377first strand
Strand 2
A
389 394anti-parallel
Strand 3
A
400 409anti-parallel
Strand 4
A
435 442parallel
Strand 5
A
419 424anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
187 189first strand
Strand 2
B
219 221anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
374 377first strand
Strand 2
B
389 394anti-parallel
Strand 3
B
400 409anti-parallel
Strand 4
B
435 442parallel
Strand 5
B
419 424anti-parallel
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