Analysis of interatomic Contacts of Structural Units in PDB entry:
5L74


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5L74 entry

There is 1 chain in PDB entry 5L74 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 653LYS 803
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 5 helices in PDB entry 5L74. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
655 659Right-handed 310
Helix 2
AA2
A
661 667Right-handed alpha
Helix 3
AA3
A
684 688Right-handed 310
Helix 4
AA4
A
690 692Right-handed 310
Helix 5
AA5
A
697 701Right-handed 310
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There are 3 sheets in PDB entry 5L74. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
680 682first strand
Strand 2
A
673 675anti-parallel
Strand 3
A
694 695anti-parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
703 704first strand
Strand 2
A
718 725anti-parallel
Strand 3
A
759 765anti-parallel
Strand 4
A
746 756anti-parallel
Strand 5
A
737 743anti-parallel
Strand 6
A
776 785anti-parallel
Strand 7
A
799 802anti-parallel
Strand 8
A
710 713parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
703 704first strand
Strand 2
A
718 725anti-parallel
Strand 3
A
759 765anti-parallel
Strand 4
A
746 756anti-parallel
Strand 5
A
737 743anti-parallel
Strand 6
A
776 785anti-parallel
Strand 7
A
789 790anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il