Analysis of interatomic Contacts of Structural Units in PDB entry:
5L7N


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5L7N entry

There is 1 chain in PDB entry 5L7N (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 861SER 1227
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 4 helices in PDB entry 5L7N. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
890 894Right-handed 310
Helix 2
AA2
A
909 912Right-handed 310
Helix 3
AA3
A
1070 1074Right-handed 310
Helix 4
AA4
A
1131 1135Right-handed 310
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There are 7 sheets in PDB entry 5L7N. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
863 868first strand
Strand 2
A
879 887anti-parallel
Strand 3
A
915 922anti-parallel
Strand 4
A
903 907anti-parallel
Strand 5
A
898 900anti-parallel
Strand 6
A
935 938anti-parallel
Strand 7
A
947 949anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
871 873first strand
Strand 2
A
954 957parallel
Strand 3
A
932 933anti-parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
960 965first strand
Strand 2
A
976 982anti-parallel
Strand 3
A
1008 1012anti-parallel
Strand 4
A
997 1004anti-parallel
Strand 5
A
991 994anti-parallel
Strand 6
A
1020 1028anti-parallel
Strand 7
A
1031 1043anti-parallel
Strand 8
A
968 970parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1047 1052first strand
Strand 2
A
1063 1069anti-parallel
Strand 3
A
1099 1103anti-parallel
Strand 4
A
1086 1096anti-parallel
Strand 5
A
1078 1083anti-parallel
Strand 6
A
1123 1127anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1055 1057first strand
Strand 2
A
1143 1145parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1149 1150first strand
Strand 2
A
1167 1172anti-parallel
Strand 3
A
1203 1206anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1187 1188first strand
Strand 2
A
1219 1221anti-parallel
Strand 3
A
1224 1226anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il