Analysis of interatomic Contacts of Structural Units in PDB entry:
5LB3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5LB3 entry

There are 2 chains in PDB entry 5LB3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 SER 10TRP 453
E
 SER 10TRP 453
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 43 helices in PDB entry 5LB3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
11 23Right-handed alpha
Helix 2
AA2
B
31 44Right-handed alpha
Helix 3
AA3
B
59 69Right-handed alpha
Helix 4
AA4
B
79 93Right-handed alpha
Helix 5
AA5
B
105 117Right-handed alpha
Helix 6
AA6
B
129 134Right-handed alpha
Helix 7
AA7
B
138 148Right-handed alpha
Helix 8
AA8
B
158 163Right-handed 310
Helix 9
AA9
B
170 174Right-handed 310
Helix 10
AB1
B
175 182Right-handed alpha
Helix 11
AB2
B
196 207Right-handed alpha
Helix 12
AB3
B
233 235Right-handed 310
Helix 13
AB4
B
237 250Right-handed alpha
Helix 14
AB5
B
251 255Right-handed 310
Helix 15
AB6
B
268 283Right-handed alpha
Helix 16
AB7
B
294 307Right-handed alpha
Helix 17
AB8
B
339 348Right-handed alpha
Helix 18
AB9
B
364 387Right-handed alpha
Helix 19
AC1
B
391 408Right-handed alpha
Helix 20
AC2
B
411 421Right-handed alpha
Helix 21
AC3
B
431 436Right-handed alpha
Helix 22
AC4
B
436 451Right-handed alpha
Helix 23
AC5
E
11 23Right-handed alpha
Helix 24
AC6
E
31 44Right-handed alpha
Helix 25
AC7
E
59 69Right-handed alpha
Helix 26
AC8
E
79 93Right-handed alpha
Helix 27
AC9
E
105 118Right-handed alpha
Helix 28
AD1
E
129 135Right-handed alpha
Helix 29
AD2
E
138 148Right-handed alpha
Helix 30
AD3
E
158 163Right-handed 310
Helix 31
AD4
E
170 174Right-handed 310
Helix 32
AD5
E
175 183Right-handed alpha
Helix 33
AD6
E
196 207Right-handed alpha
Helix 34
AD7
E
233 235Right-handed 310
Helix 35
AD8
E
237 250Right-handed alpha
Helix 36
AD9
E
268 281Right-handed alpha
Helix 37
AE1
E
294 307Right-handed alpha
Helix 38
AE2
E
339 348Right-handed alpha
Helix 39
AE3
E
364 387Right-handed alpha
Helix 40
AE4
E
390 408Right-handed alpha
Helix 41
AE5
E
411 420Right-handed alpha
Helix 42
AE6
E
431 436Right-handed alpha
Helix 43
AE7
E
436 450Right-handed alpha
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There are 4 sheets in PDB entry 5LB3. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
97 100first strand
Strand 2
B
125 128parallel
Strand 3
B
73 76parallel
Strand 4
B
153 156parallel
Strand 5
B
188 192parallel
Strand 6
B
48 51parallel
Strand 7
B
214 217parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
225 231first strand
Strand 2
B
357 363parallel
Strand 3
B
328 333parallel
Strand 4
B
261 265parallel
Strand 5
B
312 315parallel
Strand 6
B
286 289parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
97 100first strand
Strand 2
E
125 128parallel
Strand 3
E
72 76parallel
Strand 4
E
151 156parallel
Strand 5
E
188 192parallel
Strand 6
E
48 51parallel
Strand 7
E
214 217parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
225 231first strand
Strand 2
E
357 363parallel
Strand 3
E
328 333parallel
Strand 4
E
261 265parallel
Strand 5
E
312 315parallel
Strand 6
E
286 289parallel
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