Analysis of interatomic Contacts of Structural Units in PDB entry:
5LBA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5LBA entry

There are 4 chains in PDB entry 5LBA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 ASP 11SER 452
A
 ASP 11SER 452
C
 ASP 11TRP 453
D
 ASP 11TRP 453
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 86 helices in PDB entry 5LBA. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
11 23Right-handed alpha
Helix 2
AA2
B
31 44Right-handed alpha
Helix 3
AA3
B
59 69Right-handed alpha
Helix 4
AA4
B
79 92Right-handed alpha
Helix 5
AA5
B
105 118Right-handed alpha
Helix 6
AA6
B
129 134Right-handed alpha
Helix 7
AA7
B
138 148Right-handed alpha
Helix 8
AA8
B
159 163Right-handed 310
Helix 9
AA9
B
170 174Right-handed 310
Helix 10
AB1
B
175 183Right-handed alpha
Helix 11
AB2
B
196 207Right-handed alpha
Helix 12
AB3
B
233 235Right-handed 310
Helix 13
AB4
B
237 251Right-handed alpha
Helix 14
AB5
B
268 282Right-handed alpha
Helix 15
AB6
B
294 307Right-handed alpha
Helix 16
AB7
B
339 348Right-handed alpha
Helix 17
AB8
B
364 387Right-handed alpha
Helix 18
AB9
B
391 408Right-handed alpha
Helix 19
AC1
B
411 420Right-handed alpha
Helix 20
AC2
B
431 436Right-handed alpha
Helix 21
AC3
B
436 451Right-handed alpha
Helix 22
AC4
A
12 23Right-handed alpha
Helix 23
AC5
A
31 44Right-handed alpha
Helix 24
AC6
A
59 69Right-handed alpha
Helix 25
AC7
A
79 93Right-handed alpha
Helix 26
AC8
A
105 117Right-handed alpha
Helix 27
AC9
A
129 134Right-handed alpha
Helix 28
AD1
A
138 148Right-handed alpha
Helix 29
AD2
A
159 163Right-handed 310
Helix 30
AD3
A
170 174Right-handed 310
Helix 31
AD4
A
175 183Right-handed alpha
Helix 32
AD5
A
196 207Right-handed alpha
Helix 33
AD6
A
233 235Right-handed 310
Helix 34
AD7
A
237 250Right-handed alpha
Helix 35
AD8
A
268 282Right-handed alpha
Helix 36
AD9
A
294 307Right-handed alpha
Helix 37
AE1
A
339 348Right-handed alpha
Helix 38
AE2
A
364 387Right-handed alpha
Helix 39
AE3
A
390 408Right-handed alpha
Helix 40
AE4
A
411 420Right-handed alpha
Helix 41
AE5
A
431 436Right-handed alpha
Helix 42
AE6
A
437 451Right-handed alpha
Helix 43
AE7
C
12 23Right-handed alpha
Helix 44
AE8
C
31 44Right-handed alpha
Helix 45
AE9
C
59 69Right-handed alpha
Helix 46
AF1
C
79 92Right-handed alpha
Helix 47
AF2
C
105 118Right-handed alpha
Helix 48
AF3
C
129 134Right-handed alpha
Helix 49
AF4
C
135 137Right-handed 310
Helix 50
AF5
C
138 148Right-handed alpha
Helix 51
AF6
C
158 163Right-handed 310
Helix 52
AF7
C
170 174Right-handed 310
Helix 53
AF8
C
175 183Right-handed alpha
Helix 54
AF9
C
196 207Right-handed alpha
Helix 55
AG1
C
233 235Right-handed 310
Helix 56
AG2
C
237 250Right-handed alpha
Helix 57
AG3
C
268 282Right-handed alpha
Helix 58
AG4
C
294 307Right-handed alpha
Helix 59
AG5
C
339 348Right-handed alpha
Helix 60
AG6
C
364 387Right-handed alpha
Helix 61
AG7
C
389 408Right-handed alpha
Helix 62
AG8
C
411 420Right-handed alpha
Helix 63
AG9
C
431 436Right-handed alpha
Helix 64
AH1
C
436 451Right-handed alpha
Helix 65
AH2
D
12 23Right-handed alpha
Helix 66
AH3
D
31 44Right-handed alpha
Helix 67
AH4
D
59 69Right-handed alpha
Helix 68
AH5
D
79 92Right-handed alpha
Helix 69
AH6
D
105 117Right-handed alpha
Helix 70
AH7
D
129 134Right-handed alpha
Helix 71
AH8
D
135 137Right-handed 310
Helix 72
AH9
D
138 148Right-handed alpha
Helix 73
AI1
D
159 163Right-handed 310
Helix 74
AI2
D
170 174Right-handed 310
Helix 75
AI3
D
175 182Right-handed alpha
Helix 76
AI4
D
196 207Right-handed alpha
Helix 77
AI5
D
233 235Right-handed 310
Helix 78
AI6
D
237 250Right-handed alpha
Helix 79
AI7
D
268 281Right-handed alpha
Helix 80
AI8
D
294 307Right-handed alpha
Helix 81
AI9
D
339 348Right-handed alpha
Helix 82
AJ1
D
364 387Right-handed alpha
Helix 83
AJ2
D
390 408Right-handed alpha
Helix 84
AJ3
D
411 420Right-handed alpha
Helix 85
AJ4
D
431 436Right-handed alpha
Helix 86
AJ5
D
436 450Right-handed alpha
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There are 8 sheets in PDB entry 5LBA. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
97 100first strand
Strand 2
B
125 128parallel
Strand 3
B
72 76parallel
Strand 4
B
151 157parallel
Strand 5
B
188 192parallel
Strand 6
B
47 51parallel
Strand 7
B
213 217parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
225 231first strand
Strand 2
B
357 363parallel
Strand 3
B
328 333parallel
Strand 4
B
261 265parallel
Strand 5
B
312 315parallel
Strand 6
B
286 289parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
97 100first strand
Strand 2
A
125 128parallel
Strand 3
A
72 76parallel
Strand 4
A
151 157parallel
Strand 5
A
188 192parallel
Strand 6
A
48 51parallel
Strand 7
A
214 217parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
225 231first strand
Strand 2
A
357 363parallel
Strand 3
A
328 333parallel
Strand 4
A
261 265parallel
Strand 5
A
312 315parallel
Strand 6
A
286 289parallel
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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
97 100first strand
Strand 2
C
125 128parallel
Strand 3
C
72 76parallel
Strand 4
C
151 156parallel
Strand 5
C
188 192parallel
Strand 6
C
48 51parallel
Strand 7
C
214 217parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
225 231first strand
Strand 2
C
357 363parallel
Strand 3
C
328 333parallel
Strand 4
C
261 265parallel
Strand 5
C
312 315parallel
Strand 6
C
286 289parallel
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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
97 100first strand
Strand 2
D
125 128parallel
Strand 3
D
72 76parallel
Strand 4
D
151 157parallel
Strand 5
D
188 192parallel
Strand 6
D
48 51parallel
Strand 7
D
214 217parallel
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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
225 231first strand
Strand 2
D
357 363parallel
Strand 3
D
328 333parallel
Strand 4
D
261 265parallel
Strand 5
D
312 315parallel
Strand 6
D
286 289parallel
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