Analysis of interatomic Contacts of Structural Units in PDB entry:
5LEL

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5LEL entry

There are 2 chains in PDB entry 5LEL (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 12	ALA 324
B	GLY 5	ILE 348

There are126 helices in PDB entry 5LEL. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	12	25	Right-handed alpha
Helix 2	AA2	A	26	36	Right-handed alpha
Helix 3	AA3	A	49	58	Right-handed alpha
Helix 4	AA4	A	59	69	Right-handed alpha
Helix 5	AA5	A	82	90	Right-handed alpha
Helix 6	AA6	A	92	102	Right-handed alpha
Helix 7	AA7	A	115	124	Right-handed alpha
Helix 8	AA8	A	125	135	Right-handed alpha
Helix 9	AA9	A	148	156	Right-handed alpha
Helix 10	AB1	A	158	181	Right-handed alpha
Helix 11	AB2	A	182	192	Right-handed alpha
Helix 12	AB3	A	205	214	Right-handed alpha
Helix 13	AB4	A	215	225	Right-handed alpha
Helix 14	AB5	A	238	247	Right-handed alpha
Helix 15	AB6	A	248	258	Right-handed alpha
Helix 16	AB7	A	271	280	Right-handed alpha
Helix 17	AB8	A	281	291	Right-handed alpha
Helix 18	AB9	A	304	312	Right-handed alpha
Helix 19	AC1	A	314	323	Right-handed alpha
Helix 20	AC2	B	17	32	Right-handed alpha
Helix 21	AC3	B	42	51	Right-handed alpha
Helix 22	AC4	B	64	74	Right-handed alpha
Helix 23	AC5	B	82	87	Right-handed alpha
Helix 24	AC6	B	90	97	Right-handed alpha
Helix 25	AC7	B	128	130	Right-handed 310
Helix 26	AC8	B	131	141	Right-handed alpha
Helix 27	AC9	B	153	162	Right-handed alpha
Helix 28	AD1	B	163	165	Right-handed 310
Helix 29	AD2	B	185	201	Right-handed alpha
Helix 30	AD3	B	209	219	Right-handed alpha
Helix 31	AD4	B	228	230	Right-handed 310
Helix 32	AD5	B	231	239	Right-handed alpha
Helix 33	AD6	B	273	283	Right-handed alpha
Helix 34	AD7	B	286	297	Right-handed alpha
Helix 35	AD8	B	304	312	Right-handed alpha
Helix 36	AD9	B	314	327	Right-handed alpha
Helix 37	AE1	B	335	352	Right-handed alpha
Helix 38	AE2	B	356	368	Right-handed alpha
Helix 39	AE3	C	5	9	Right-handed 310
Helix 40	AE4	C	56	61	Right-handed 310
Helix 41	AE5	C	68	72	Right-handed 310
Helix 42	AE6	C	75	81	Right-handed 310
Helix 43	AE7	C	82	88	Right-handed alpha
Helix 44	AE8	D	13	25	Right-handed alpha
Helix 45	AE9	D	26	36	Right-handed alpha
Helix 46	AF1	D	49	58	Right-handed alpha
Helix 47	AF2	D	59	69	Right-handed alpha
Helix 48	AF3	D	82	90	Right-handed alpha
Helix 49	AF4	D	92	102	Right-handed alpha
Helix 50	AF5	D	115	124	Right-handed alpha
Helix 51	AF6	D	125	135	Right-handed alpha
Helix 52	AF7	D	148	156	Right-handed alpha
Helix 53	AF8	D	158	181	Right-handed alpha
Helix 54	AF9	D	182	192	Right-handed alpha
Helix 55	AG1	D	205	214	Right-handed alpha
Helix 56	AG2	D	215	225	Right-handed alpha
Helix 57	AG3	D	238	247	Right-handed alpha
Helix 58	AG4	D	248	258	Right-handed alpha
Helix 59	AG5	D	271	280	Right-handed alpha
Helix 60	AG6	D	281	291	Right-handed alpha
Helix 61	AG7	D	304	312	Right-handed alpha
Helix 62	AG8	D	314	322	Right-handed alpha
Helix 63	AG9	E	16	32	Right-handed alpha
Helix 64	AH1	E	42	51	Right-handed alpha
Helix 65	AH2	E	64	74	Right-handed alpha
Helix 66	AH3	E	82	87	Right-handed alpha
Helix 67	AH4	E	90	97	Right-handed alpha
Helix 68	AH5	E	130	141	Right-handed alpha
Helix 69	AH6	E	153	162	Right-handed alpha
Helix 70	AH7	E	163	165	Right-handed 310
Helix 71	AH8	E	185	201	Right-handed alpha
Helix 72	AH9	E	209	219	Right-handed alpha
Helix 73	AI1	E	228	230	Right-handed 310
Helix 74	AI2	E	231	239	Right-handed alpha
Helix 75	AI3	E	273	283	Right-handed alpha
Helix 76	AI4	E	286	297	Right-handed alpha
Helix 77	AI5	E	304	312	Right-handed alpha
Helix 78	AI6	E	314	327	Right-handed alpha
Helix 79	AI7	E	335	352	Right-handed alpha
Helix 80	AI8	E	356	368	Right-handed alpha
Helix 81	AI9	F	5	9	Right-handed 310
Helix 82	AJ1	F	56	61	Right-handed 310
Helix 83	AJ2	F	68	72	Right-handed 310
Helix 84	AJ3	F	75	81	Right-handed 310
Helix 85	AJ4	F	82	88	Right-handed alpha
Helix 86	AJ5	G	14	25	Right-handed alpha
Helix 87	AJ6	G	26	36	Right-handed alpha
Helix 88	AJ7	G	49	58	Right-handed alpha
Helix 89	AJ8	G	59	69	Right-handed alpha
Helix 90	AJ9	G	82	90	Right-handed alpha
Helix 91	AK1	G	92	102	Right-handed alpha
Helix 92	AK2	G	115	124	Right-handed alpha
Helix 93	AK3	G	125	135	Right-handed alpha
Helix 94	AK4	G	148	156	Right-handed alpha
Helix 95	AK5	G	158	181	Right-handed alpha
Helix 96	AK6	G	182	192	Right-handed alpha
Helix 97	AK7	G	205	214	Right-handed alpha
Helix 98	AK8	G	215	225	Right-handed alpha
Helix 99	AK9	G	238	247	Right-handed alpha
Helix 100	AL1	G	248	258	Right-handed alpha
Helix 101	AL2	G	271	280	Right-handed alpha
Helix 102	AL3	G	281	291	Right-handed alpha
Helix 103	AL4	G	304	312	Right-handed alpha
Helix 104	AL5	G	314	323	Right-handed alpha
Helix 105	AL6	H	17	32	Right-handed alpha
Helix 106	AL7	H	42	51	Right-handed alpha
Helix 107	AL8	H	64	74	Right-handed alpha
Helix 108	AL9	H	82	87	Right-handed alpha
Helix 109	AM1	H	90	97	Right-handed alpha
Helix 110	AM2	H	130	141	Right-handed alpha
Helix 111	AM3	H	153	164	Right-handed alpha
Helix 112	AM4	H	185	201	Right-handed alpha
Helix 113	AM5	H	209	219	Right-handed alpha
Helix 114	AM6	H	228	230	Right-handed 310
Helix 115	AM7	H	231	236	Right-handed alpha
Helix 116	AM8	H	273	283	Right-handed alpha
Helix 117	AM9	H	286	297	Right-handed alpha
Helix 118	AN1	H	304	312	Right-handed alpha
Helix 119	AN2	H	314	327	Right-handed alpha
Helix 120	AN3	H	335	352	Right-handed alpha
Helix 121	AN4	H	356	368	Right-handed alpha
Helix 122	AN5	I	5	9	Right-handed 310
Helix 123	AN6	I	57	61	Right-handed 310
Helix 124	AN7	I	68	72	Right-handed 310
Helix 125	AN8	I	78	81	Right-handed 310
Helix 126	AN9	I	82	88	Right-handed alpha

There are 19 sheets in PDB entry 5LEL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	34	38	first strand
Strand 2	B	6	10	parallel
Strand 3	B	59	63	parallel
Strand 4	B	258	266	anti-parallel
Strand 5	B	105	111	anti-parallel
Strand 6	B	301	302	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	34	38	first strand
Strand 2	B	6	10	parallel
Strand 3	B	59	63	parallel
Strand 4	B	258	266	anti-parallel
Strand 5	B	328	329	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	98	99	first strand
Strand 2	B	102	103	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	145	147	first strand
Strand 2	B	222	227	parallel
Strand 3	B	114	118	anti-parallel
Strand 4	B	242	245	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	171	172	first strand
Strand 2	B	175	176	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	249	250	first strand
Strand 2	B	253	254	anti-parallel

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There are 12 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	11	22	first strand
Strand 2	C	25	36	anti-parallel
Strand 3	C	41	48	anti-parallel
Strand 4	C	217	227	anti-parallel
Strand 5	C	199	208	anti-parallel
Strand 6	C	148	155	anti-parallel
Strand 7	C	160	170	anti-parallel
Strand 8	C	176	187	anti-parallel
Strand 9	C	92	100	anti-parallel
Strand 10	C	105	115	anti-parallel
Strand 11	C	118	128	anti-parallel
Strand 12	C	11	22	parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	35	38	first strand
Strand 2	E	7	10	parallel
Strand 3	E	59	63	parallel
Strand 4	E	258	266	anti-parallel
Strand 5	E	105	112	anti-parallel
Strand 6	E	301	302	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	35	38	first strand
Strand 2	E	7	10	parallel
Strand 3	E	59	63	parallel
Strand 4	E	258	266	anti-parallel
Strand 5	E	328	329	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	98	99	first strand
Strand 2	E	102	103	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	145	147	first strand
Strand 2	E	222	227	parallel
Strand 3	E	114	118	anti-parallel
Strand 4	E	242	245	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	171	172	first strand
Strand 2	E	175	176	anti-parallel

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There are 12 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	11	22	first strand
Strand 2	F	27	36	anti-parallel
Strand 3	F	41	48	anti-parallel
Strand 4	F	217	227	anti-parallel
Strand 5	F	199	208	anti-parallel
Strand 6	F	149	155	anti-parallel
Strand 7	F	160	170	anti-parallel
Strand 8	F	176	187	anti-parallel
Strand 9	F	92	100	anti-parallel
Strand 10	F	105	115	anti-parallel
Strand 11	F	118	128	anti-parallel
Strand 12	F	11	22	parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	37	38	first strand
Strand 2	H	9	10	parallel
Strand 3	H	59	63	parallel
Strand 4	H	258	266	anti-parallel
Strand 5	H	105	112	anti-parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	37	38	first strand
Strand 2	H	9	10	parallel
Strand 3	H	59	63	parallel
Strand 4	H	258	266	anti-parallel
Strand 5	H	328	329	parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	98	99	first strand
Strand 2	H	102	103	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	145	147	first strand
Strand 2	H	222	227	parallel
Strand 3	H	114	118	anti-parallel
Strand 4	H	242	245	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	167	172	first strand
Strand 2	H	175	182	anti-parallel

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There are 12 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	11	22	first strand
Strand 2	I	27	36	anti-parallel
Strand 3	I	41	48	anti-parallel
Strand 4	I	217	227	anti-parallel
Strand 5	I	199	208	anti-parallel
Strand 6	I	148	155	anti-parallel
Strand 7	I	160	170	anti-parallel
Strand 8	I	176	187	anti-parallel
Strand 9	I	92	100	anti-parallel
Strand 10	I	105	115	anti-parallel
Strand 11	I	118	128	anti-parallel
Strand 12	I	11	22	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5LEL

Analysis of interatomic Contacts of Structural Units in PDB entry:
5LEL