Analysis of interatomic Contacts of Structural Units in PDB entry:
5LEW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5LEW entry

There is 1 chain in PDB entry 5LEW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 7ASP 933
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 47 helices in PDB entry 5LEW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
27 38Right-handed alpha
Helix 2
AA2
A
53 64Right-handed alpha
Helix 3
AA3
A
91 98Right-handed 310
Helix 4
AA4
A
99 104Right-handed alpha
Helix 5
AA5
A
114 132Right-handed alpha
Helix 6
AA6
A
141 148Right-handed alpha
Helix 7
AA7
A
161 169Right-handed alpha
Helix 8
AA8
A
171 187Right-handed alpha
Helix 9
AA9
A
200 218Right-handed alpha
Helix 10
AB1
A
234 247Right-handed alpha
Helix 11
AB2
A
267 276Right-handed alpha
Helix 12
AB3
A
281 293Right-handed alpha
Helix 13
AB4
A
316 333Right-handed alpha
Helix 14
AB5
A
340 356Right-handed alpha
Helix 15
AB6
A
357 374Right-handed alpha
Helix 16
AB7
A
382 387Right-handed 310
Helix 17
AB8
A
388 394Right-handed alpha
Helix 18
AB9
A
400 405Right-handed alpha
Helix 19
AC1
A
407 412Right-handed alpha
Helix 20
AC2
A
430 443Right-handed alpha
Helix 21
AC3
A
457 471Right-handed alpha
Helix 22
AC4
A
474 484Right-handed alpha
Helix 23
AC5
A
495 500Right-handed 310
Helix 24
AC6
A
512 520Right-handed alpha
Helix 25
AC7
A
520 532Right-handed alpha
Helix 26
AC8
A
553 557Right-handed 310
Helix 27
AC9
A
574 580Right-handed alpha
Helix 28
AD1
A
592 609Right-handed alpha
Helix 29
AD2
A
613 617Right-handed 310
Helix 30
AD3
A
621 631Right-handed alpha
Helix 31
AD4
A
641 652Right-handed alpha
Helix 32
AD5
A
655 666Right-handed alpha
Helix 33
AD6
A
667 673Right-handed alpha
Helix 34
AD7
A
674 684Right-handed alpha
Helix 35
AD8
A
693 701Right-handed alpha
Helix 36
AD9
A
713 726Right-handed alpha
Helix 37
AE1
A
728 742Right-handed alpha
Helix 38
AE2
A
743 761Right-handed alpha
Helix 39
AE3
A
764 782Right-handed alpha
Helix 40
AE4
A
784 805Right-handed alpha
Helix 41
AE5
A
805 817Right-handed alpha
Helix 42
AE6
A
820 834Right-handed alpha
Helix 43
AE7
A
868 882Right-handed alpha
Helix 44
AE8
A
887 895Right-handed alpha
Helix 45
AE9
A
898 911Right-handed alpha
Helix 46
AF1
A
914 918Right-handed 310
Helix 47
AF2
A
920 933Right-handed alpha
Back to top of page

There are 5 sheets in PDB entry 5LEW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
42 45first strand
Strand 2
A
67 76parallel
Strand 3
A
137 140parallel
Strand 4
A
133 134anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
42 45first strand
Strand 2
A
67 76parallel
Strand 3
A
106 112anti-parallel
Strand 4
A
152 155anti-parallel
Strand 5
A
191 195parallel
Strand 6
A
221 223parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
424 427first strand
Strand 2
A
584 591parallel
Strand 3
A
537 549anti-parallel
Strand 4
A
447 455anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
560 562first strand
Strand 2
A
569 571anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
837 839first strand
Strand 2
A
856 858parallel
Strand 3
A
851 853anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il