Analysis of interatomic Contacts of Structural Units in PDB entry:
5LG4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5LG4 entry

There are 3 chains in PDB entry 5LG4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 33GLU 227
B
 MET 74THR 249
C
 SER 75THR 249
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 5LG4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
34 69Right-handed alpha
Helix 2
AA2
A
73 109Right-handed alpha
Helix 3
AA3
A
112 156Right-handed alpha
Helix 4
AA4
A
161 169Right-handed alpha
Helix 5
AA5
A
192 194Right-handed 310
Helix 6
AA6
A
195 223Right-handed alpha
Helix 7
AA7
B
76 94Right-handed alpha
Helix 8
AA8
B
130 132Right-handed 310
Helix 9
AA9
B
173 175Right-handed 310
Helix 10
AB1
B
202 221Right-handed alpha
Helix 11
AB2
B
232 237Right-handed 310
Helix 12
AB3
B
239 247Right-handed alpha
Helix 13
AB4
C
76 94Right-handed alpha
Helix 14
AB5
C
130 132Right-handed 310
Helix 15
AB6
C
173 175Right-handed 310
Helix 16
AB7
C
202 221Right-handed alpha
Helix 17
AB8
C
232 237Right-handed 310
Helix 18
AB9
C
239 247Right-handed alpha
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There are 2 sheets in PDB entry 5LG4. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
164 171first strand
Strand 2
B
147 158anti-parallel
Strand 3
B
134 144anti-parallel
Strand 4
B
107 117anti-parallel
Strand 5
B
195 200anti-parallel
Strand 6
B
187 191anti-parallel
Strand 7
B
177 180anti-parallel
Strand 8
B
227 229parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
164 171first strand
Strand 2
C
151 158anti-parallel
Strand 3
C
134 143anti-parallel
Strand 4
C
107 117anti-parallel
Strand 5
C
195 200anti-parallel
Strand 6
C
187 191anti-parallel
Strand 7
C
177 180anti-parallel
Strand 8
C
227 229parallel
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