Analysis of interatomic Contacts of Structural Units in PDB entry:
5LHZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5LHZ entry

There are 6 chains in PDB entry 5LHZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 886SER 963
B
 LEU 887PHE 962
C
 LEU 887SER 963
D
 GLN 729MET 750
E
 ASP 730MET 750
F
 GLN 729MET 750
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 6 helices in PDB entry 5LHZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
945 962Right-handed alpha
Helix 2
AA2
B
945 961Right-handed alpha
Helix 3
AA3
C
945 962Right-handed alpha
Helix 4
AA4
D
730 749Right-handed alpha
Helix 5
AA5
E
731 749Right-handed alpha
Helix 6
AA6
F
730 749Right-handed alpha
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There are 3 sheets in PDB entry 5LHZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
887 893first strand
Strand 2
A
897 902anti-parallel
Strand 3
A
906 911anti-parallel
Strand 4
A
916 920anti-parallel
Strand 5
A
925 929anti-parallel
Strand 6
A
935 939anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
891 893first strand
Strand 2
B
897 901anti-parallel
Strand 3
B
906 911anti-parallel
Strand 4
B
916 920anti-parallel
Strand 5
B
925 929anti-parallel
Strand 6
B
935 939anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
890 893first strand
Strand 2
C
897 901anti-parallel
Strand 3
C
906 911anti-parallel
Strand 4
C
916 920anti-parallel
Strand 5
C
925 929anti-parallel
Strand 6
C
935 939anti-parallel
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